Gene Tcr_1084 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1084 
Symbol 
ID3760586 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp1164776 
End bp1166668 
Gene Length1893 bp 
Protein Length630 aa 
Translation table11 
GC content47% 
IMG OID637785805 
ProductDNA mismatch repair protein MutL 
Protein accessionYP_391353 
Protein GI78485428 
COG category[L] Replication, recombination and repair 
COG ID[COG0323] DNA mismatch repair enzyme (predicted ATPase) 
TIGRFAM ID[TIGR00585] DNA mismatch repair protein MutL 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.967595 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTCTCAAT TGCCTAATAT TCCGTCAAAA AAATGTCTTG ATATTTCCTT GTTGCCTTCG 
CATTTAGCCG ATCAGATTGC GGCTGGAGAA GTGGTTGAAA GGCCGGCTTC GGTTGTTAAG
GAGTTGTTGG AAAATGCGTT GGATTCCGGG GCGACTCAAA TAGAAATTCA GATTGAAGAA
GGCGGAGAGA AACTGATTTC CGTTATCGAT AATGGAATGG GAATCCGCCA GTCACAATTG
ATGTTGGCGG TGAGCCGACA TGCCACCAGT AAAATCCATA CAGCACAAGA TTTGGCCGCA
GTGGCCACGC TAGGCTTTCG AGGTGAGGCA TTGGCAAGTA TCAGCTCGGT TTCTCGTTTA
ACCTTAACCA GTAAATTTCA AGGGGAAAGC GCCGCTTGGC AATTAAGTGG TGAAGGAGAA
GGCCGTTGGT CAGAGCCCAC GCCCACTGCG CACCCGCAAG GCACTCACGT TGAAGTTAAA
GATTTATTTT TTAATACACC GGCGCGCAAG AAATTTTTAA GAGCGGCACG CACTGAGTTC
ATGCATATTG ACCAACTGGT TAAGCGGGTG ATGCTGAGTC GCCCTGAAAT TTCCATGAAA
TTGGTGCATA ACCAAAAAGT GGTACGCCAA GTGCATGCGG CGCATGATGA CGCGGCGTTA
AAGCAGCGTT TGAAACAATT GATGGGCACA CCGTTTGTCG ATCAAAGCCT GGAACTGAAT
TTTGAAGCAC AGGATATCCA ACTGAGCGGC TGGGTCGGGC AAGCGACTTT TAATCGTAGT
CAAACCGACA TGCAGTATTT ATTTGTGAAC GGTCGTATTG TAAGAGATCG GTTGTTGTCT
TATGCGGTTA AACAGGCGTA TGCGGACGTT CTTTACCATG GTCGTCACCC TGCCTATTTG
TTGTTTTTAA ACATTCCACA TGATCTGGTC GATGTGAATG TGCACCCTGC GAAATATGAA
GTGCGTTTTG CAAATGGGCG CTGGGTGTAT GACTTTTTGC GCCGTTCCGT CCGAGAGGCG
GTTACGCAAC CAGTTGGGGT TGCTTCCAAT CCAAATAATG CGGCCTTAAT ACCTTCTAAT
GTTTTTTCAG GAAATCATTC AGGGGAATCC CATCAGATGG ATTCTCAGGT ATCTCAATCG
GCCATGCAAT TTCAAATGCC TTCCTCTTCA GCGAGCGGCT CGGGTATGGG CGTGTCTGAA
TCTGTTCCCT ATTATGCGAT GGCACCCGAT GCAGAAACGG TTGAGTCCCT TAAAAATCGT
TTTCACGAAG CCGACGCCTA TTCTCAAAAT AGCACCCCCA TACTTGGGTA TGCAAAAGCG
CAAATCCATG GCGTGTTTAT TTTGGCAGAA AATGAAAAAG GGTTGGTGCT GGTGGATATG
CATGCCGCGC ATGAACGCAT TGTGTATGAA CGCATTGTGT ATGAACGCAT GAAGCAACAG
TGGCAACAGG ATCGTTTGAT TTCGCAACCG TTGTTGGTGC CGATTGTGGT GAGTCTAGAA
TCCTCACAGG TTCAGGTTTG GGAGGCTTAT CAAGAAGAGT TTCAAAAACT GGGCTTTGAA
GCGGAAGCAT TCGGCCCGGA GCAATTAAAA TTTACGATGG TGCCGAGTTT GTTGTCAAAG
TCGGATATTC CACGTTTGAT TAATGACATG ATTGCCGATT TAGCGGTGGC TGGACAGACG
CAATTGGTGG ATGAGAAAAT CAATGCCATT TTAAGTACCA TGGCGTGTCA TGGTTCGGTT
CGAGCCAATC GCCATCTTAC CTTGGATGAA ATGAATGCTT TGCTACGCGA CATGGAGGCC
ACCGAGAGTT CTGCTCAGTG TAATCATGGG CGCCCAACCT GGGTTCAATT AAGTATGGAA
CAGCTGGATG GGCTGTTCAT GAGAGGACAA TAA
 
Protein sequence
MSQLPNIPSK KCLDISLLPS HLADQIAAGE VVERPASVVK ELLENALDSG ATQIEIQIEE 
GGEKLISVID NGMGIRQSQL MLAVSRHATS KIHTAQDLAA VATLGFRGEA LASISSVSRL
TLTSKFQGES AAWQLSGEGE GRWSEPTPTA HPQGTHVEVK DLFFNTPARK KFLRAARTEF
MHIDQLVKRV MLSRPEISMK LVHNQKVVRQ VHAAHDDAAL KQRLKQLMGT PFVDQSLELN
FEAQDIQLSG WVGQATFNRS QTDMQYLFVN GRIVRDRLLS YAVKQAYADV LYHGRHPAYL
LFLNIPHDLV DVNVHPAKYE VRFANGRWVY DFLRRSVREA VTQPVGVASN PNNAALIPSN
VFSGNHSGES HQMDSQVSQS AMQFQMPSSS ASGSGMGVSE SVPYYAMAPD AETVESLKNR
FHEADAYSQN STPILGYAKA QIHGVFILAE NEKGLVLVDM HAAHERIVYE RIVYERMKQQ
WQQDRLISQP LLVPIVVSLE SSQVQVWEAY QEEFQKLGFE AEAFGPEQLK FTMVPSLLSK
SDIPRLINDM IADLAVAGQT QLVDEKINAI LSTMACHGSV RANRHLTLDE MNALLRDMEA
TESSAQCNHG RPTWVQLSME QLDGLFMRGQ