| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_1041 |
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| Symbol | |
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| ID | 3760563 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiomicrospira crunogena XCL-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007520 |
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| Strand | + |
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| Start bp | 1118154 |
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| End bp | 1119746 |
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| Gene Length | 1593 bp |
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| Protein Length | 530 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 637785762 |
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| Product | PAS/PAC sensor signal transduction histidine kinase |
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| Protein accession | YP_391310 |
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| Protein GI | 78485385 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.622945 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTTTTT CGCAACAAAA CGTTCTCGCT CTCACAAAAG AACCATATTT TTTAACGTAT
TTTGAACAAA ATAATTCTGA TAATCTGACG GTTTGTGACA ATCTTTCGGA TTTGGTTGAT
CGAGTGAAAA GTGCGGCGGA TGACAAACAT CCATATCATT TTGTTTTTAT GGATGAATCG
ATGTTGTCCA AATCAGACGT TGAGTCGATT CTAAACCAAT TGCATAAGAT CAATTCGGCA
CTGTTTTATC TGATTTCGTG TACCGATTTA AATGAAGAGT GGTTAAACAA ACTGCAAAAA
ACGACCCGTA ATCAAGTGAT TTTTGTTGAC GAAAAACCTG CTTATGCTTT GTTAAAACAG
GCGGAAATGC AAATTGTTCG GTTAGCCGAT CTACAACTAA CGATTGTCAA AAAATCGGAT
CAGTTTAAAA CGGTTCAGCA AAAGCTGGCT GTACGGGATA AATTGTTTAA CAATCTTTTA
AGTGTTATTA AGTTTGATTC AGAAGGAAAC ATAATCAGTA TTAACCCACA TGGAACCACA
GAGATGGGGT GGCGTAATGC CGAAGTGTTA GGTATGTCTA TTCATGATAT TGTGCTGTGG
TCTAATGATG GTTCCGGTAT TGTGCAGTAT TTTGAAACCT TTTCCGGTGA AACGCGTTAT
TTTGATAACG AAGGGAAGCA AAGATGGGCG TTCGCGCAAG TTAAAAAAGT TAAAGAACAT
AATCGTAATT ATTTTTATTT TATCGGTAAA GACATTACCG AACAAAAGCA GTTTGCCAGA
CGCCTTCAAT ATGAAAATTA TCAAGAAGGG ATACTGAAAG CCAAAAGTGA TTTAATTCAT
GATATCGGTA ATACCTTGAA TAGTATGAAT GCGACCTATG GCGTGTTGGC TTCCGGTGTT
GAACAGCTAA AAGGGGTGGC CAATTATATT GAGCGTTGGT GTGAAGAAAA ACAATCATTA
AGCTTGCCCG TCGAAACCTC ATATCATTTT ATTGAAGCCA TTGAAAACAG TTGTCACTTT
ATACTAGATA AACACTTTTC AAAAACGACG CTTGCCCTGA AAAATGATTT AGCGCTCTTA
ATTGATGCGG TAGGCACGAA ACAACAGATC TTACCCGTTG AAAATGCTAA AGAAGTGATC
AACGTATACA ACCTGATTCA AGAAGTGATA CTGTCGAGTC AAGCGTTGTT GAATGAGAAG
CAGATTAGTA TTCAGCTACT GGATGCCAAC CCTTCAATTT TCTTGAAACT GTCTCATAAT
CAGTTATTTC AAGCTCTGTT GAATTTGATT AAGAATGCGG TGGAAGCCAT TGAAGCATCA
GATAAAACGA CCAGGCAGAT TACCTTACAG GCATGTCAAA CAGAAGAGGC TATTCTGCTG
ATGGTTCAGG ACTCCGGGAA GGGGGTTGAA TCGCTTGATT TAAAGAAAAT TTTTAATTAT
GGGTATACCA CAAAAGAGGG CGGCTCAGGC CATGGCCTGC ACTCTGTGGC CAATTTTATG
AATAAGAATG GTGGAAAAGT TGAAGTGGCG TCGTCCAAAG AAGGAGGGGC ACGCTTTACT
TTAACTTTTC CGATAAGTTT ATCAGAGATC TAA
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| Protein sequence | MSFSQQNVLA LTKEPYFLTY FEQNNSDNLT VCDNLSDLVD RVKSAADDKH PYHFVFMDES
MLSKSDVESI LNQLHKINSA LFYLISCTDL NEEWLNKLQK TTRNQVIFVD EKPAYALLKQ
AEMQIVRLAD LQLTIVKKSD QFKTVQQKLA VRDKLFNNLL SVIKFDSEGN IISINPHGTT
EMGWRNAEVL GMSIHDIVLW SNDGSGIVQY FETFSGETRY FDNEGKQRWA FAQVKKVKEH
NRNYFYFIGK DITEQKQFAR RLQYENYQEG ILKAKSDLIH DIGNTLNSMN ATYGVLASGV
EQLKGVANYI ERWCEEKQSL SLPVETSYHF IEAIENSCHF ILDKHFSKTT LALKNDLALL
IDAVGTKQQI LPVENAKEVI NVYNLIQEVI LSSQALLNEK QISIQLLDAN PSIFLKLSHN
QLFQALLNLI KNAVEAIEAS DKTTRQITLQ ACQTEEAILL MVQDSGKGVE SLDLKKIFNY
GYTTKEGGSG HGLHSVANFM NKNGGKVEVA SSKEGGARFT LTFPISLSEI
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