| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_0860 |
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| Symbol | |
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| ID | 3761744 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiomicrospira crunogena XCL-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007520 |
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| Strand | + |
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| Start bp | 937201 |
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| End bp | 938394 |
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| Gene Length | 1194 bp |
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| Protein Length | 397 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 637785580 |
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| Product | diguanylate phosphodiesterase |
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| Protein accession | YP_391130 |
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| Protein GI | 78485205 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3434] Predicted signal transduction protein containing EAL and modified HD-GYP domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAAAAC TTTTTATTGG CCGACAGCCA ATTTTTGATC GTTCAAATCA AGTCTATGGG
TATGAACTTC TTTTTAGAAA TGGGTTTCAT CCTAATGAAG CGGTATTCGA TGATGACCAT
TATGCAACGG CGACCGTGAT TCATAACTCC ATGATGGGGT TGGCGTTAAG TGATTTAGTC
GGGAATGCGA AGGCGTTTAT CAACTTTCCG GAATCGTTTT TTGAGCCTGA AGTGGATCCT
TGTTTTTCCT CCAACCGTAT AGTGTGTGAA GTGCTGGAAA CCGTGCCGGT GACCGAAGCG
ACTTTAGCAG GCATAAAGCG TTTAAAACAA AAAGGGTTTC CCATCGCGTT GGATGACTTC
GTGTTTAAAA AAGAATTTAT TCCTTTCATT CGTTTGACAG ACATTATCAA GCTGGATATC
GAAAACGTAA ACCCCAGCAA GATTCCGTTG TTGGTTCAAA AAATTCGTGG CGTGGCCAGT
GCTCGTACCA AAATCTTAGT TGAAAGAGTG GAAACGAAAG ACGTTCACCA AACCTGCTTA
GAAGCCGGCT GTGATTATTT TCAAGGGTAT TATTTTGCCA AGCCAGAAAT TGTCACCGGG
CAACAACTTT CGGTCTCCAA GTTGCATTTG TTTGAGTTGT TACGAAACCT TTCCGAACCG
AGCATTTCAT TAGATAAGTT GGAAGAAATT GTTTCAAAAG ATGTCGGTTT GATGCATAAA
CTGGTAAAAC TTGCAGTACA ACATCGCACG GCTAAAATGC CGGAATTTGA TACATTAAGA
CAAGTTTTGG TTTTATTTGG ATTGAAGCGC GTTCAATCAT GGGCGAGTAT GATTTCCTTG
AGTTTGATGG ATGATGTGGT ACCCGAAGTC TTTAATATCG CGAGAACACG TGCTGTTTTC
ATGCGGCTGT GTGCTCAGCA TGAAAAGTTA TCCAATCCAG AGTCTTATTA TTTAACAGGG
ATGTTCTCGT TGTTAGATGT CATTCTTAAA AAACCGATGG AGGAATTGCT TAAAAGTTTG
GCTTTAAATG AGGCGATTAT TCAAGGTATT TTAAATGAAA AGGGCGATTA CGGACGGCTT
TTGAAAATGG TAAAATCCTT TGAACGGTCT GATTCCGATG AGTTGGAAGA GGTGTACCGG
TATCTTTATG TTCAAGCTTT AAAAGAAAGT CATGATACTC AGGAGGTGAT GTAA
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| Protein sequence | MEKLFIGRQP IFDRSNQVYG YELLFRNGFH PNEAVFDDDH YATATVIHNS MMGLALSDLV
GNAKAFINFP ESFFEPEVDP CFSSNRIVCE VLETVPVTEA TLAGIKRLKQ KGFPIALDDF
VFKKEFIPFI RLTDIIKLDI ENVNPSKIPL LVQKIRGVAS ARTKILVERV ETKDVHQTCL
EAGCDYFQGY YFAKPEIVTG QQLSVSKLHL FELLRNLSEP SISLDKLEEI VSKDVGLMHK
LVKLAVQHRT AKMPEFDTLR QVLVLFGLKR VQSWASMISL SLMDDVVPEV FNIARTRAVF
MRLCAQHEKL SNPESYYLTG MFSLLDVILK KPMEELLKSL ALNEAIIQGI LNEKGDYGRL
LKMVKSFERS DSDELEEVYR YLYVQALKES HDTQEVM
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