Gene Tcr_0858 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_0858 
Symbol 
ID3761742 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand- 
Start bp934996 
End bp935616 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content46% 
IMG OID637785578 
Productputative prophage repressor 
Protein accessionYP_391128 
Protein GI78485203 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG1974] SOS-response transcriptional repressors (RecA-mediated autopeptidases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAGAAA AAAACACAAC AGCGGGTGGC GCAAGAAAAG GCGCAGGGCG TAAAAAAGGC 
TCAGGAAAAT TTGGCGAAGA CACCAAGGTG ATTCGAGTGC CGGAATCAAA AGTAACGGTT 
GTAAAGCACT GGCTTTCAGA GCAGGCGGAA GCCGAGCAAC AACAAAAAAC CTTACAAGAA 
GCACAAGCCT TAGCGGGAGA TAAATTACAG ATTCAACTTC CGGAATTTAA TGAAGAGGTG 
TTGCTACCTC TGCACAGTCA TAAAGTGGTG GCTGGTTTTC CTAGTCCGGC GGATGATTAT 
GTAGAAACCC GATTGGATTT GAACGACAAA CTCATTCAAA ACAAACAAGC CACATTCCTG 
TTGACCGTAC AGGGCGACTC AATGAAAAAA GCGGGGATTC AAGATGGGGA TATTTTAGTG 
GTGGACCGAA GTTTAACGCC GCAGGATGGC AAAATCGTCA TCGCCGCGTT GGATGGAGAA 
CTGACCGTAA AGACATTGTC CATTAAGTCC ACTGGCACAT GGCTGGTGCC CGAGAATGAT 
AACTACCCCC CTATTCCCGT CAGAGAGGAA TCTGATATTG TTATTTGGGG TGTAGTGACC 
GCGACGATTA AACAATTCTA A
 
Protein sequence
MTEKNTTAGG ARKGAGRKKG SGKFGEDTKV IRVPESKVTV VKHWLSEQAE AEQQQKTLQE 
AQALAGDKLQ IQLPEFNEEV LLPLHSHKVV AGFPSPADDY VETRLDLNDK LIQNKQATFL 
LTVQGDSMKK AGIQDGDILV VDRSLTPQDG KIVIAALDGE LTVKTLSIKS TGTWLVPEND 
NYPPIPVREE SDIVIWGVVT ATIKQF