Gene Tcr_0855 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_0855 
Symbol 
ID3761739 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand- 
Start bp932735 
End bp933655 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content46% 
IMG OID637785575 
Producthistone deacetylase superfamily protein 
Protein accessionYP_391125 
Protein GI78485200 
COG category[B] Chromatin structure and dynamics
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0123] Deacetylases, including yeast histone deacetylase and acetoin utilization protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones47 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTTTAT ATTTAAGCTC TCCTCTCTGC CAGCAACATA GTAATGGCTG GGGGCATCCC 
GAAAATGCAC AGCGTGTCGT TCGTATAGAA CAGGCTTTAA CTGACGCCCG GCTGTTATCC 
AACACCCTTC ACAAAAGCAT TCTACCCGCC ACCGAAATTG ATGTGCTACG CGTTCATTCC 
TCGCCTTTTT GGGAAACCTT AAAAAAACAC CTTCCTGAAA ACGGCTTTGT CAAAATCGAT 
GAGGATACTT CGTTAAGCCC TGGCAGTTTA GAATCTGCTT TAGCGGCCAG CGGTGCGATG 
CTAACCGCAA TTGATGCCAT CATGCATCGA GAAGCGAAGC AAGCTTTTTG TAATATTCGC 
CCTCCTGGAC ATCATGCGGA AAGAAATCGT CCCATGGGGT TTTGTCTTAT CAACCACATT 
GCCATCGGTG CCGCTTATGC GTTGGAAAAA TATGCCTTAG AACGCATTGT CATTGTCGAC 
TTTGACGTCC ATCATGGCAA TGGCACAGAA GACTATGTTC GACACGAAGC ACGTGTGGGA 
TATGTCTCCA GTTTTCAGGA AGGCATTTTC CCTTTTACCG ACCCAATTTC AGACTTGGAC 
AATATGCGCA AACTCCCGCT CCCGGCTCAA AGTGATGGCA AAGAATTTAT GACGGCATGG 
CAACAGAACG GGTTTGAGTT CATTCGGAAA TTCAACCCAC AACTGATTTT AGTTTCGGCT 
GGATTTGATG CGCACAAGAA CGACCCTCTC GCCAGTTTAA ACCTGACAGA ACAAGATTTT 
TATCACTGGA CACAACAACT CATGATGCTT GCCAATGACA TTTGTGACGG CAGAGTCATT 
TCAATTTTGG AAGGCGGTTA TGAGTTAAAT GCGCTGGCGG ATTCCGCCGT CGCACATGTA 
AAAGCACTGC AAGGTGCCTA A
 
Protein sequence
MFLYLSSPLC QQHSNGWGHP ENAQRVVRIE QALTDARLLS NTLHKSILPA TEIDVLRVHS 
SPFWETLKKH LPENGFVKID EDTSLSPGSL ESALAASGAM LTAIDAIMHR EAKQAFCNIR 
PPGHHAERNR PMGFCLINHI AIGAAYALEK YALERIVIVD FDVHHGNGTE DYVRHEARVG 
YVSSFQEGIF PFTDPISDLD NMRKLPLPAQ SDGKEFMTAW QQNGFEFIRK FNPQLILVSA 
GFDAHKNDPL ASLNLTEQDF YHWTQQLMML ANDICDGRVI SILEGGYELN ALADSAVAHV 
KALQGA