| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_0785 |
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| Symbol | |
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| ID | 3761709 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiomicrospira crunogena XCL-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007520 |
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| Strand | + |
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| Start bp | 859536 |
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| End bp | 861044 |
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| Gene Length | 1509 bp |
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| Protein Length | 502 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637785503 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_391055 |
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| Protein GI | 78485130 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 42 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCCAGATC AAAAACCGCT TGTTCAACCG GTTCCTCCTA GGTGGGGTTA CTTCATAGCG
ATCGCTTTAG TGGGGGCAAT CGCTTTGTTG TTTCAGTTGG TTTACAGCTT GAAACAAAAC
CAGGCCTTGT TTGATACGCA GGTGCAGTAT TTAACAGAAA GTGTTCAGGG CGCGTTTTAT
GATTCGGCGA CTAATCTTAA AGATAAGTAT AACTTTCTGT TATTACACTA CAGTCACTTG
CAGGATATTA CACGCTTAGT CAATCCTGCT GACAGGCAGG CACTTTATCA GAAAGTTAAA
GTGGATTTTG ACGCCATGCA AAAGAAAGAC CCTAGCTTAT TCGTAATGCA TTTTCACTCT
CCGAAGAACA TTACGATTTT ACGGGTACAC AATCCCAAAG CGTATGGGGA TGATGTTACA
AAAACTCGCC CTATGGTGGT TTATGTCAAT AAGAATCGCC ATCAAGTCAG TGCGTTTGAA
GCGGGAAGAA CAGGGCTTTC GTATCGAATC AACACGCCTT TTTTCAGCGA GGGTGGGCAA
TATTTAGGTG TTTTGGAAAT CGGTGTCAAG CCGGAATATT TCATCAAGCG ACTTAAAAAT
CGGTTTGATG TTCAAGCTCG TTTACTGGTC AAAAAGAGTG CGTTCAAGCA TTTTGAATAT
GAACGAGATT ATCCTAAAAT TGGACGCTAC TCCGTCATCT ATTCCGATCC TATATTTAAT
GAGATGGATA TCTACAAATC TGAAAAATCG CAGTTGATTC ATAAAGACGG TAAAACGTAT
TTAGTTGTTT CGGGCCTGCA TTTGAACTCT TATGACGGTC ACCCACTGGC AGAATTTCAA
GTGGTTGAAG ACGTTTCACA TTTTTATCAA AAACACATGC GAAGTTTTTG GTTGCACTGG
GTGTTGAACA TTGCCGGCTT GTTGGTTTTT CTAGTCTTAA TGTATTTTAT TCTAAAGCGC
TACAGCGACC GCTTGATGAA ATCGATGAAT ACAATCAATG TCTTGCAGCA AAAAAATGAA
GCCATGAAAT ACAACAGTGA AATTGATGAG CTGACACAAG CATATAACCG CCGTTACTTT
AATCAAAAAT TACGTCAGCT TCTGCATTAC CAGGATAACC GCCATCCAGT TTCCGTGATG
TTTTATGATA TTGACTTTTT TAAGCAGATC AATGATACCC ACGGCCATTT AGTCGGCGAT
GAAATTTTAA AATCACTGAG TCATTTTATT CGAGGGCATT TACGCTCTGA AGACATTCTG
GTGCGCTGGG GCGGTGAAGA GTTTGCGGTT GTTCTAAAAG AAGCGCATTT ACAGCAAGCG
GTCGAAAAAG CAGAAGAGCT TCGCCAGGCC GTTGAAGAAA AAACATGGCC GAATGATGTC
AAAATGACCA TCAGTATCAG TGTGATTGAG TTACATGAAA ATGATAATCT TAAGTCGTTA
CAAGCGCGAC TGGATGATTT GCTCTACAAC GCAAAAGAAT CGGGCCGTAA TCGCGTAGAG
CATGAATGA
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| Protein sequence | MPDQKPLVQP VPPRWGYFIA IALVGAIALL FQLVYSLKQN QALFDTQVQY LTESVQGAFY
DSATNLKDKY NFLLLHYSHL QDITRLVNPA DRQALYQKVK VDFDAMQKKD PSLFVMHFHS
PKNITILRVH NPKAYGDDVT KTRPMVVYVN KNRHQVSAFE AGRTGLSYRI NTPFFSEGGQ
YLGVLEIGVK PEYFIKRLKN RFDVQARLLV KKSAFKHFEY ERDYPKIGRY SVIYSDPIFN
EMDIYKSEKS QLIHKDGKTY LVVSGLHLNS YDGHPLAEFQ VVEDVSHFYQ KHMRSFWLHW
VLNIAGLLVF LVLMYFILKR YSDRLMKSMN TINVLQQKNE AMKYNSEIDE LTQAYNRRYF
NQKLRQLLHY QDNRHPVSVM FYDIDFFKQI NDTHGHLVGD EILKSLSHFI RGHLRSEDIL
VRWGGEEFAV VLKEAHLQQA VEKAEELRQA VEEKTWPNDV KMTISISVIE LHENDNLKSL
QARLDDLLYN AKESGRNRVE HE
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