Gene Tcr_0687 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_0687 
Symbol 
ID3760978 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand+ 
Start bp759821 
End bp760486 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content47% 
IMG OID637785400 
ProductPhage baseplate assembly protein V 
Protein accessionYP_390957 
Protein GI78485032 
COG category[R] General function prediction only 
COG ID[COG4540] Phage P2 baseplate assembly protein gpV 
TIGRFAM ID[TIGR01644] phage baseplate assembly protein V 


Plasmid Coverage information

Num covering plasmid clones52 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTGAGT ACGGAAAAAT CGAAAAACAG GATTTCAGCG GTGATGTGCT GATGTATCGC 
GTGCGTATGA GCACGGGTGA GCTTTCTCCT TGGATGACTG CTTTGACCAT TTCTGCCGGT 
ACATCACGAA AGAATTCTCC ATTGTCTATC GGCACGCAAG TTTCAGTTTT GATGGCTGGT 
ATTTACGAGG GCGTTATTTT AGGGGCAATC AACTCAAAAG ATGCCAAGGC CGTCTCGCAA 
AGCGACAAGA TTGACCGAAC AAAATATGAC GATGGTGCGG TGATTGAATA CGATCAGGAA 
ACCCATTCAC TAAAAGCGAC TTTACCTGCC GGCGGTAAAA CACATTTAGA TAGCAGTGGC 
GGCATTACAT TTGATGGCGA CATGACCCTG AATGGCAATA TGGATATTCA AGGTGACCTA 
TCCGTTTCAG GCGATACCAG TATTGGTGGC AAGATTGATG TTACAGGCAA TGGTTCTATT 
GGCGGAAATC TTTCTGTTGC TGGTGTTTGC GGTGTTGGAA GTTTGGCTGC AGCATCAGGA 
GGTGGTGCAG TGCCTTGTAC TGGTGGTATG GATGTTACGG ACGGTGACTT GGTGGCAAAT 
GGCATTAGCC TAACAAACCA CCACCATGTT GATTCGCAGG GTGGAACAAC GAGTACACCA 
TTATGA
 
Protein sequence
MIEYGKIEKQ DFSGDVLMYR VRMSTGELSP WMTALTISAG TSRKNSPLSI GTQVSVLMAG 
IYEGVILGAI NSKDAKAVSQ SDKIDRTKYD DGAVIEYDQE THSLKATLPA GGKTHLDSSG 
GITFDGDMTL NGNMDIQGDL SVSGDTSIGG KIDVTGNGSI GGNLSVAGVC GVGSLAAASG 
GGAVPCTGGM DVTDGDLVAN GISLTNHHHV DSQGGTTSTP L