| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_0663 |
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| Symbol | |
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| ID | 3761354 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiomicrospira crunogena XCL-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007520 |
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| Strand | + |
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| Start bp | 739879 |
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| End bp | 740817 |
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| Gene Length | 939 bp |
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| Protein Length | 312 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 637785376 |
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| Product | NAD-dependent DNA ligase |
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| Protein accession | YP_390933 |
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| Protein GI | 118139511 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0272] NAD-dependent DNA ligase (contains BRCT domain type II) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000000015383 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTCGTTG GTATGATGTT TATTAATTTA GTAAAGAGAT TTTTTGCAAT GAATCTTGAC
GTGAACGGTC AGCCTGTAAT GGCTTTTAAC TTTCGTGAAA ATGTAGATAA AGCTTTTGAA
AACTTGATGG GGATTTTATC GGGTATTCAA GCTGATGAAG CTATGACAAA TGGTGAGGTT
GTTTTTTTGC AAAACTGGCT GTCAGATCAG AAGTATTTGC ATAATGATCC TGATGTTTTC
GATTTGCTGG ATTTGCTGAG CTCTATTTTG GAGGATGGTA TTATCACCAG CGATGAAAAA
GCTGATTTAT CTCAGCTTGT TTCCGATGTA TTGGAATATC GTGATGATTA TGTCTATATG
GGTGATGTGG ACAAAGATGC TTTTAGACGT GCCTTGGGTG TTTTTTCTGG AATAGCTGCT
GATGATGAAT TGACTGATAT GGAAGTGAGT TATTTGAATG AGTGGCTTGA TTCACATGGT
GAGCTGATAT GTCACTGGCC GATCAGTAAA GTAAATAGGT TGGTGAAATC TGCTTTAGAA
GATGGAGTTA TCACAGGTGA AGAACGTGAA AGCATATTGT CAGTGTTGTA TGAAGCGGTT
GGCGGTGCAT TTTCCGATGA TGGTGCAGCA TCAGGAAAGA CAACGACTTT GCCGATTGAC
GATGTTGACT GTGTTGAATT TGACGGTAAA GTTTTTTGCA TTACCGGGGC TTTAGCGTAT
GGTACAAGAA AAGAATGCCA GGATTTGATA TTGAAATTTG GCGGCAAGGT ATCAAAAGGA
ATTACAAAAA AATTGGATTA TCTAGTAGTT GGTCCGGTAG CAAGTAGGGA TTGGTTTAAT
ACTTCTTATG GCAGAAAAAT TGAAAAAGCC GTTGGTTACC GTGATGAAGG CTATGGATTG
AAGATTATTT CTGAAGAAGT ATGGCGAAAA AGCTTTTAA
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| Protein sequence | MVVGMMFINL VKRFFAMNLD VNGQPVMAFN FRENVDKAFE NLMGILSGIQ ADEAMTNGEV
VFLQNWLSDQ KYLHNDPDVF DLLDLLSSIL EDGIITSDEK ADLSQLVSDV LEYRDDYVYM
GDVDKDAFRR ALGVFSGIAA DDELTDMEVS YLNEWLDSHG ELICHWPISK VNRLVKSALE
DGVITGEERE SILSVLYEAV GGAFSDDGAA SGKTTTLPID DVDCVEFDGK VFCITGALAY
GTRKECQDLI LKFGGKVSKG ITKKLDYLVV GPVASRDWFN TSYGRKIEKA VGYRDEGYGL
KIISEEVWRK SF
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