Gene Tcr_0621 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_0621 
Symbol 
ID3760343 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp695441 
End bp695857 
Gene Length417 bp 
Protein Length138 aa 
Translation table11 
GC content40% 
IMG OID637785334 
Producthypothetical protein 
Protein accessionYP_390891 
Protein GI78484966 
COG category[S] Function unknown 
COG ID[COG1426] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.503342 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTAATG AAGCGCAGCA CCAAGAATTT ACTTCTGATG AAAAACCCGC TTTTACGGAT 
CTCAGTCGAG CATTGAGAAC GGCAAGAGAA CAGAAAAAGC TATCTATCGG TGATGTGGCC
GAGCAATTAA AAATAGCGTC ATCTCATATT CAATACTTTG AAGGCGATCG CTTGGATTTG
ACTCAATTGG ATCCTTTTCA AAGAGGCTAT CTCAGAAATT ATTCCGAATT ATTGAATGTT
GATATTAAAC CCTATGAATC CGTTTTTCCA GAAGTGGTTG ATGTGGGGTC GAGTCTGCAA
TCGGTTGATT TGGAAGAACA TGCTACCAAA CCGATCATCT CTATTGCCAT GATGAGAATT
CTCAGTAGCT TAGCGGTGAT TGGGATCATC ATTTTGCTGA TAGCCATTAA CGTATAA
 
Protein sequence
MANEAQHQEF TSDEKPAFTD LSRALRTARE QKKLSIGDVA EQLKIASSHI QYFEGDRLDL 
TQLDPFQRGY LRNYSELLNV DIKPYESVFP EVVDVGSSLQ SVDLEEHATK PIISIAMMRI
LSSLAVIGII ILLIAINV