| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_0552 |
|---|
| Symbol | |
|---|
| ID | 3762372 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thiomicrospira crunogena XCL-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007520 |
|---|
| Strand | + |
|---|
| Start bp | 618025 |
|---|
| End bp | 618912 |
|---|
| Gene Length | 888 bp |
|---|
| Protein Length | 295 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 637785265 |
|---|
| Product | putative lipoprotein |
|---|
| Protein accession | YP_390822 |
|---|
| Protein GI | 78484897 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 39 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTATCA AACCGTATCT AACACCACTT TATGCGTTAT CAGTCGCGGC ATTACTATCA
GGCTGTCAAT CCGACTCTGG ATCAGGGTCA GATGGCTCAT TAAGCGTAGG CTTAACGGAT
GCGCCAATAG ATGAAGCCCA ACACGTGTAT GTTTCAATAA AAGGCCTTTC ATTAAACCAT
GAAGGAGAAG GCTGGGTTGA TTACAATTTC GATAACGTAC AACGTGTTGA TCTCCTGTCT
CTTCAATCGG GTAATACTTT GAGCTTGGTA GAGAACATTA CAGTGCCATC TGGTAATTAT
AAAGTCCGCC TGAATCTGGC AACAGATGAT GGTGATGCTA TTCCAGAACA TGCTATTGTT
CTGACAGACG GTACAGAATA CTCGATAACC ATTCCAAGTG GGTATCAAAC GGGCCTGAAG
CTGACCTCTG ACATTTCTGT TTTAGCGAAT GGCTCAGCGA GCTATACCAT TGACTTTGAT
GTTCGTAAGT CGATTGTTCA AACGTCCTCA ACCAGCTATA AACTTAAACC GGTATTGCAC
GTCGTTGACA ATGCGGATGT TGGTTCTATT TCGGGTTCGA TAGAAACGAG CGCTTTAACG
GCCGGAACCT GCTCTGATGC GGATCCAGAC ACTTACAATG CTGTTTATGT GTTTAAGGGC
AGTAATGTGA CGCCAGATGA CATAGGTTCA AGCGGGGCTC AGGCCGTAGC TACAACGCCA
GTTGAATACG ATTCAGGAAC CGGTCAGTAT CAATACAAAT CGGCTTTTCT ACAGGAAGGT
GATTATACAG TTGCTTTTAC ATGCAGTGCG AATTTAGAGG ATACCGAAAC GGATGATGAG
CTGAATTTTG TCACGCTTGG TAACTATACT GTAACGGCCG GCAATTAA
|
|---|
| Protein sequence | MTIKPYLTPL YALSVAALLS GCQSDSGSGS DGSLSVGLTD APIDEAQHVY VSIKGLSLNH
EGEGWVDYNF DNVQRVDLLS LQSGNTLSLV ENITVPSGNY KVRLNLATDD GDAIPEHAIV
LTDGTEYSIT IPSGYQTGLK LTSDISVLAN GSASYTIDFD VRKSIVQTSS TSYKLKPVLH
VVDNADVGSI SGSIETSALT AGTCSDADPD TYNAVYVFKG SNVTPDDIGS SGAQAVATTP
VEYDSGTGQY QYKSAFLQEG DYTVAFTCSA NLEDTETDDE LNFVTLGNYT VTAGN
|
|---|
| |