| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_0540 |
|---|
| Symbol | |
|---|
| ID | 3761587 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thiomicrospira crunogena XCL-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007520 |
|---|
| Strand | + |
|---|
| Start bp | 605819 |
|---|
| End bp | 606562 |
|---|
| Gene Length | 744 bp |
|---|
| Protein Length | 247 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 637785252 |
|---|
| Product | phosphate uptake regulator, PhoU |
|---|
| Protein accession | YP_390810 |
|---|
| Protein GI | 78484885 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0704] Phosphate uptake regulator |
|---|
| TIGRFAM ID | [TIGR02135] phosphate transport system regulatory protein PhoU |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 40 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATAAGC AAGAATTTAG TACACATATT TCTGAAATGC TGAATCGAAA TCTGGAAGAT
TTATTTAACC ACATTCTAGA AATGGGAGGG ATGGTTGAAC GTCAACTTGA AAATGCCCTT
CAATCTTTAG GCAGTTCAGA CATTGATAAA GCACAAGAAG TGATTTCGTT CGATAAAGCG
ATTAATCATG CTGAAATGGA AATTGACCGT TTGTGTGCCA AAGTACTGGC TCGCCAGCAA
CCTACAGCTT CAGACTTACG CTTGATTTTG GCCGCTATTC GTATTGCGAT TGATTTAGAG
CGAATGGGCG ATGAGGTCGT AAAACTGGCA AAACTGGTGA TTGTTTTCGG TAAGCACGAG
GGCGTGAAGT GTTCAGAAAT TCAAGGGTAT GCGGAGTTAG TTGATATTTC AAACCGTTCG
AGTGTCATGC TTAAAATGAC ATTGGATTCG TTTGCCAGAG TGTCAACCGA TGGCGTTGGA
AAGGTCATCC GCGAAGAAGA AGTCATTGAT GATATCTTCA AAAAAATAGA AAAAGAACTG
AAAGAGTCAT TAAAAACGTC TCCAGATAAA ATTGAATGTT TAATGGAAAT GATTATTGCA
TTAAGAGCGG CGGAGCGTGT TTCAGATCAT GCCAGAAACA TTGTTGAAAG TATTTTGTAT
CTGGTGCAAG GCGATGATGT CAGAAACCTG GATGAAAGAC GATTGAATGA ATTATTAAAC
ACGTTAGAGT CACCAAAAGG ATAA
|
|---|
| Protein sequence | MDKQEFSTHI SEMLNRNLED LFNHILEMGG MVERQLENAL QSLGSSDIDK AQEVISFDKA
INHAEMEIDR LCAKVLARQQ PTASDLRLIL AAIRIAIDLE RMGDEVVKLA KLVIVFGKHE
GVKCSEIQGY AELVDISNRS SVMLKMTLDS FARVSTDGVG KVIREEEVID DIFKKIEKEL
KESLKTSPDK IECLMEMIIA LRAAERVSDH ARNIVESILY LVQGDDVRNL DERRLNELLN
TLESPKG
|
|---|
| |