Gene Tcr_0485 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_0485 
Symbol 
ID3762281 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp542611 
End bp542973 
Gene Length363 bp 
Protein Length120 aa 
Translation table11 
GC content47% 
IMG OID637785196 
ProductIojap-related protein 
Protein accessionYP_390755 
Protein GI78484830 
COG category[S] Function unknown 
COG ID[COG0799] Uncharacterized homolog of plant Iojap protein 
TIGRFAM ID[TIGR00090] iojap-like ribosome-associated protein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value3.40385e-16 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGGATA GTCAGCAAGT AGAAGCGTTA ATCGTTAGTA CTTTGGAAGA TAGTAAAGCG 
CGAGATATTC AAGTTTTGGA TGTTTCAAAA CTTTCTTCCT TTACCGATAA GATGGTCATT
GCAACAGGGA CGTCAACCAC ACATGTCCGC TCTACGGGGA ATGCGGTGGC ACAAGCGTTT
AAAGAAGCCG GTGAACCACC AATGGGTGTG GAAGCCGGTC CAGAGCCTGA TTGGGTTTTG
GTGGATCTTG GTAACGCCAT TGTTCACGTG ATGACAGAGT CCGCACGAGC ACATTACCAG
CTTGAAAAAT TATGGAATAT CAAGCCGGGT GAAGGTGAGA GTCTCGATTC AGCAAACGGC
TGA
 
Protein sequence
MMDSQQVEAL IVSTLEDSKA RDIQVLDVSK LSSFTDKMVI ATGTSTTHVR STGNAVAQAF 
KEAGEPPMGV EAGPEPDWVL VDLGNAIVHV MTESARAHYQ LEKLWNIKPG EGESLDSANG