Gene Tcr_0483 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_0483 
Symbol 
ID3762279 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand- 
Start bp541303 
End bp541923 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content41% 
IMG OID637785194 
Productheat shock protein DnaJ-like 
Protein accessionYP_390753 
Protein GI78484828 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.000132964 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAAATA TTCATATGAC AATTCCTGAA ATCCCTTCGT TATTTGAAGA AGCGGTTTAC 
CAACTGCTTT CAAATGGCGA GCCGATTAAA GAATACGACC TGATGAAGCG ATTGGTCGCT 
TTAGGGTTTG ACCAGTTCAC CCCTTCTCTA GAACCTTTAG AACTTTTCAG AGCACATTTT 
TTATTGTTTC ATTTATTGTA TCGACTTCAA GATAAGTGGC ACACCGAAAA GAAAGGCACG 
CTCAACATTC ACACTTTGGA TATTTATTTA GACCTAGCAC CTAAAGAAGA TACAACGCAA 
AAGCTATCGG AAATTGATGG GGTCAAAACG TACTATCTGG ACTATGAAAC CTTTATTCAC 
ACCCAAGAAC AAGACGTCAT TGATTTAATT GACGGGTTTT GGAAAAGTTT TGGAGAATCC 
GGGGCCCTCT CTTACAGTCA AAAAGAGATT CAAGCCGCCA AACAGACACT GGAAATTGAA 
ACCGACATCA CACCCAAAAA AGTGCATCTG CAATATCGCA AACTGTCTCA AATCCACCAT 
CCTGACAAAG GTGGCAAAGC CGAAGCATTC CATGCTATCT GCCATGCCAA GGAAGTGTTA 
CTGACGGCGG CCGAAACTTA A
 
Protein sequence
MSNIHMTIPE IPSLFEEAVY QLLSNGEPIK EYDLMKRLVA LGFDQFTPSL EPLELFRAHF 
LLFHLLYRLQ DKWHTEKKGT LNIHTLDIYL DLAPKEDTTQ KLSEIDGVKT YYLDYETFIH 
TQEQDVIDLI DGFWKSFGES GALSYSQKEI QAAKQTLEIE TDITPKKVHL QYRKLSQIHH 
PDKGGKAEAF HAICHAKEVL LTAAET