Gene Tcr_0456 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_0456 
Symbol 
ID3761483 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp513241 
End bp514317 
Gene Length1077 bp 
Protein Length358 aa 
Translation table11 
GC content46% 
IMG OID637785167 
Productcobalamin synthesis protein/P47K 
Protein accessionYP_390726 
Protein GI78484801 
COG category[R] General function prediction only 
COG ID[COG0523] Putative GTPases (G3E family) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.576952 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGTCAA AGACCGCACT CAATATTATT TCTGGTCAAC TAGGGGCCGG GAAAACCACC 
CTGCTCCAAC AGTTACTCCG ACAACGTCCC ACACATGAAA CGTGGGTTTT ACTGGTCAAT
GAATTTGGTG CAGTGGGGAT TGATGGGCCC ATTTTAAGCA GCCAAAATGA CCACACCTTA
GTCAAGCAGC TTCCCGGTGG TTGTATTTGC TGTACAGCAC AAGGAGAACT TGAAGCCGCT
GTCTTAGACA TTATTCAAAC ACAGCAACCG GACCGCATTC TGATTGAGCC GACAGGGCTT
GGAGAACCTG AAAGCTTAGT TGACTTATTC AAACAAGCCA AACTGCAAAG TCTGTGTGAG
GTTCATTCAC TTTTTTCGGT GCTTGATATG GCGCACACTC AGTTAGAAGA ACTTCAGACG
TTATCGATTT TACAAAGCAT GTTAACGATG GCAGACGTCA TTGTGCTCAA TAAAGTGGAC
TTAGTCTCTC CTGAACAAAT CAGGTTATTC AAAGACTATA TTGACACGCT GTACCCGCCT
AAAAAAGCCG TCATCGTGAC AGAACAAGCC GACGTGTCGT CCAGTTACTT GAATCATCCG
CACTTTCACA CGCCGGCTTA TGTTGCTGCC CCCAGCTCTT CTCATACGCT AGCACGACAC
AGTCAGCCGA TGACGTCTAT AAGCACTCAA GAGCCGTCTT ACACACCTAT CGAGTTGCCA
GGCCTTTTAG AAAGACGCTT CCAAACACAC CTTAAAACAG AATCGATTGG TTGGGTGTTT
AATGATGACG TTTGTTTTGA GTGGTCTAAA CTGTTGGCAC TTTTTGAAAA CTTGTCAGCA
GGCACTTTTA CACATCAGTC AAACATCATC GCGACGCCCA TCAAACGTGC CAAGGGCATT
TTCCGCGTCG GACACACCGC TCGAATGCTG TTTCAACTCG TTCACAACAC CCTTACACGA
GAACTGATTG CCTACCGCAA GGACAGTCGC TTAGAGCTTT TGTTAGACAT TAGCGCTGAC
TTTGACTATG AAGCATTTGA GAAAGCATTA CTCGATTGCA TACAACGCCC TTCCTAA
 
Protein sequence
MTSKTALNII SGQLGAGKTT LLQQLLRQRP THETWVLLVN EFGAVGIDGP ILSSQNDHTL 
VKQLPGGCIC CTAQGELEAA VLDIIQTQQP DRILIEPTGL GEPESLVDLF KQAKLQSLCE
VHSLFSVLDM AHTQLEELQT LSILQSMLTM ADVIVLNKVD LVSPEQIRLF KDYIDTLYPP
KKAVIVTEQA DVSSSYLNHP HFHTPAYVAA PSSSHTLARH SQPMTSISTQ EPSYTPIELP
GLLERRFQTH LKTESIGWVF NDDVCFEWSK LLALFENLSA GTFTHQSNII ATPIKRAKGI
FRVGHTARML FQLVHNTLTR ELIAYRKDSR LELLLDISAD FDYEAFEKAL LDCIQRPS