Gene Tcr_0433 details

Gene Information

• Locus tag: Tcr_0433
• ID: 3761252
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thiomicrospira crunogena XCL-2
• Kingdom: Bacteria
• Replicon accession: NC_007520
• Strand: -
• Start bp: 486111
• End bp: 486812
• Gene Length: 702 bp
• Protein Length: 233 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 637785144
• Product: ABC transporter related
• Protein accession: YP_390703
• Protein GI: 78484778
• COG category: [V] Defense mechanisms
• COG ID: [COG1136] ABC-type antimicrobial peptide transport system, ATPase component

Plasmid Coverage information

• Num covering plasmid clones: 40
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGTGCTAC TGAATTTACA CAACATCGGA AAATCTTACC ATCAGGGTGA GTTAGAAGTG 
TCTGCACTTA AGGACATCAA CCTTAAAATA CAAGAAGGCG AGTTTGCTGC ACTTGTCGGT 
CCATCAGGTT CAGGTAAAAC CACGTTACTT AATATCATTG GCGGGTTAGA CATTCCATCC 
ACGGGTTCTA TCCAAATACA TGAAACCGAC TTAAAGACTT TATCAGAATC AGAACTTTCA 
GACTTTCGTT TATTTCAGCT GGGGTTTATT TTTCAGGCCT ACAATCTGGT TCCAGTATTA 
AATGCACTCG AAAATGTAGA ACTGGTCATG GTACTCCAAG GGCGCCCGAA AATAGAACGC 
CGTGAAAGAG CGGAACATTA CTTAGGGTTA GTCGGCTTAC AGGATGTGAT GACCCGCCGC 
CCTGCCGCTT TAAGTGGTGG CCAACAGCAA CGCGTTGCCG TTGCGCGAGC ATTAGCAGCA 
GGGCCTCGTC TTGTATTGGC CGATGAGCCA ACCGCCAATT TAGATTCTGA AAATGCTTTT 
GCTTTGCTGG ATATCATGCA CCGTTTATCC CATGAAGAAA AAACAACTTT TCTCTTTTCC 
ACGCACGATC AACGAGTCAT GGAACGGGCT GAGCGAATCA TCACATTAAA AGATGGTTCG 
ATTGAAAATG ACCAACAAAT TAACACCGCT CCGCATGAAT AG 

 

Protein sequence

MVLLNLHNIG KSYHQGELEV SALKDINLKI QEGEFAALVG PSGSGKTTLL NIIGGLDIPS 
TGSIQIHETD LKTLSESELS DFRLFQLGFI FQAYNLVPVL NALENVELVM VLQGRPKIER 
RERAEHYLGL VGLQDVMTRR PAALSGGQQQ RVAVARALAA GPRLVLADEP TANLDSENAF 
ALLDIMHRLS HEEKTTFLFS THDQRVMERA ERIITLKDGS IENDQQINTA PHE