| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_0416 |
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| Symbol | |
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| ID | 3761197 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiomicrospira crunogena XCL-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007520 |
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| Strand | - |
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| Start bp | 466599 |
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| End bp | 467432 |
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| Gene Length | 834 bp |
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| Protein Length | 277 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637785127 |
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| Product | ApbE-like lipoprotein |
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| Protein accession | YP_390686 |
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| Protein GI | 78484761 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1477] Membrane-associated lipoprotein involved in thiamine biosynthesis |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.00253803 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGCCAA CACTTGCTAA ACGAATGAGA CCTCTACTCG GAACCTTTGT TGAAATCGGT
GCGTTTATGC ACGACCAGAA GGAAGGCATT TTAAATCAGA TATTCAATAA AATAGAATGC
ATTCATAATC AAATGAGTTT TCACAATCCC AATAGTGCGT TGTCCAACCT CAACAAGTCA
CCTGGTAAAT GGATCGACCT GCCGAATGAA ACGCTCTCAG TTATGCGCAA AGCCAAACAG
CTGAGCTTGG ATTCCGACCA TCTTTTTAAC TGCACGCTTG GCGGGTATCT GGTAAAGAAA
AACATACTCC CGAACCACTT CGTGCACTCT TTTCAACCGA GCGGCAAAGC ATCGGATATT
GAGATACGAA ATCATCAGGC CCGACTCACA GCGCCGGTTT TAATTTCGTT GGACGGAATT
GCAAAGGGTT ACGCCGTTGA TCTAGCCATT GATGTTATGA AACAACACAA CATTGTGGCG
GGCTGGGTGA ATGCCGGTGG AGACATGAAA GTCTTTGGCG ACCTGACATT ACCTGTCAGC
CAGCGCCAGA AACACACAAG CCTTCAGCCA CTTGTTCAAC TTAACAATCA AGCGCTTGCC
TCTTCAGAAG TTCACTCGCA AAGCAACGCA CGTTTTCCTG GTCAAATTCT TGATAACACA
GGTCAGCAAC CAAACCCCGG AGTCATCAGT GTCATGGCAA AAGACTCTTG GCTGGCCGAC
GGCTTGACCA AAGTCTTGGC TTTGCAACCC GAATCAGAAC GGCACACAAC AGCAAAACGC
TTTAATGCGA TATATCTCGC TTCGTCAACG TCAATCAACA GGACCGCTTT ATGA
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| Protein sequence | MMPTLAKRMR PLLGTFVEIG AFMHDQKEGI LNQIFNKIEC IHNQMSFHNP NSALSNLNKS
PGKWIDLPNE TLSVMRKAKQ LSLDSDHLFN CTLGGYLVKK NILPNHFVHS FQPSGKASDI
EIRNHQARLT APVLISLDGI AKGYAVDLAI DVMKQHNIVA GWVNAGGDMK VFGDLTLPVS
QRQKHTSLQP LVQLNNQALA SSEVHSQSNA RFPGQILDNT GQQPNPGVIS VMAKDSWLAD
GLTKVLALQP ESERHTTAKR FNAIYLASST SINRTAL
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