Gene Tcr_0411 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_0411 
Symbol 
ID3761192 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand+ 
Start bp461052 
End bp461621 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content43% 
IMG OID637785122 
Producthypothetical protein 
Protein accessionYP_390681 
Protein GI78484756 
COG category[S] Function unknown 
COG ID[COG2862] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value0.647586 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAATC AAGCAAGCTC TCCAGCACCG GATAAAAATC CAGAGCAACA AGGTCTGGCT 
GAAAAATACT TTGAAGGGGT TCTTTGGAAC AGCCGTTTTG TGGTGCTGTT AGCCGTTGTA 
GCCAGTTTGA TTATGGCGTT TGGTATTTTT TATTTGACGG CCATTGATGT GTATTACACC 
ATGGCGCACC TGATGCATTA TCATGAATTG GGCGATGCCG AAAGAGCGGC GTTGAAATCA 
CAGACCGTTG CCCATGTGGT CGGGTCGGTG GATGGCTTTC TACTGGGCAC CATTATGTTG 
ATCTTCTCTT TGGGGCTGTA TGAACTGTTT ATTTCCAAAA TTGATGCGGC AACCGGCAAT 
AAAAGTTCCA GCAAGATTTT GATTATCAAC TCGTTGGATG ACTTGAAAGA CAAACTTGCG 
AAAGTTATTC TGTTGATTTT AATCGTGATG TTCTTCGAAC AGGCGTTATT CCTAAAACCG 
ACGGCGCCGC TTGAGTTATT GTATTACTCA TTAGCCATTA TGTTAGTGGC ACTCGCATTG 
TATTTATCAC ACAAAGCGTA TCAGCACTAA
 
Protein sequence
MENQASSPAP DKNPEQQGLA EKYFEGVLWN SRFVVLLAVV ASLIMAFGIF YLTAIDVYYT 
MAHLMHYHEL GDAERAALKS QTVAHVVGSV DGFLLGTIML IFSLGLYELF ISKIDAATGN 
KSSSKILIIN SLDDLKDKLA KVILLILIVM FFEQALFLKP TAPLELLYYS LAIMLVALAL 
YLSHKAYQH