Gene Tcr_0406 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_0406 
Symbol 
ID3761187 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand+ 
Start bp457111 
End bp457782 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content48% 
IMG OID637785117 
Producthypothetical protein 
Protein accessionYP_390676 
Protein GI78484751 
COG category[S] Function unknown 
COG ID[COG3159] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTCCAGCT TGATTAATGA TATTCATGCC GAAGATGTGG CGAATTATTT GAACCGAAAT 
CGTGAATTTT TTCATGTGTT TCCGAACTTA CTGAATGAGC TGAGTATTCC GCATCCGAAA 
AGTGGTCATG AGGTTTCGTT GTTGGAACGT CAGGTGTTTC AGTTAAGAGA ACAGCGTGAC 
AGTTTGCAAG TTGAAGTGGA CACGCTGAAA GACATTGCCG GTGAAAACGG TGCCTTGCTG 
CATAAAGTGT ATGATTTATC GTACGCCTTG CTGGCGGCGG AATCGGAGCA GGAGGCTGTC 
AATGTGGTTT ATGATGTGAT GCACGATGTC TTTACGGTAG AGGAAGTGAC CATCATTTCT 
TGGGAAGTGC CGAAATCATC GGTGCATGGC GTGAATCAGC TGGGGATTTC CCAGGCCTGG 
TCCCAAAGTC TTAAAGAGAC TTTGCAGCCG GGTAAACCGG TGTGTGGTTT GTTGGAAGAC 
AGTTGGCAGA AAGGGCTGTT TCATACGGAT AAAGCGATGC AATCCGTTTG CGTGATTCCT 
CTCGGGCAAC AGCGTGTCTG GGGAGCTTTG GCATTGGGGG CGACCACGGA TCGTTTTAGT 
CCAGAGCTAG GCACGTACTT TTTAAAAGTG ATGGGACAGA TGGTCACAGC GCGATTACAG 
CGTCTGTTTT AA
 
Protein sequence
MSSLINDIHA EDVANYLNRN REFFHVFPNL LNELSIPHPK SGHEVSLLER QVFQLREQRD 
SLQVEVDTLK DIAGENGALL HKVYDLSYAL LAAESEQEAV NVVYDVMHDV FTVEEVTIIS 
WEVPKSSVHG VNQLGISQAW SQSLKETLQP GKPVCGLLED SWQKGLFHTD KAMQSVCVIP 
LGQQRVWGAL ALGATTDRFS PELGTYFLKV MGQMVTARLQ RLF