| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_0200 |
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| Symbol | |
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| ID | 3761639 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiomicrospira crunogena XCL-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007520 |
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| Strand | - |
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| Start bp | 237060 |
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| End bp | 238118 |
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| Gene Length | 1059 bp |
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| Protein Length | 352 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637784905 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_390470 |
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| Protein GI | 78484545 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.321217 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTGATAG ATATTAAAGA TGTCCCCGAA AAAGCCCAGC GCATTTTCGT TCAGCTCATT
GATATTTTCG AAGAGCAAGA CATTAATCCG ACCCCGCTGA ATTATTATAT TTGGTACCAA
TACTACAAAG GGGATCACCC TAAATTTCGT CAAGAGATGG ACAATGCGCT GCAAGACCCC
TTTGGCTACA ACGACCGCTT AGGGCGACGC TTGTACGATG AATACTTTTC GGATGAAAAA
TCAAACAATG ACTTTGATCG TGCATTTAAA CGTCTGATCA ATCTTGTCAT TAAAAAAATG
AACGTGTGGA GCGATAAGCT TGAAAAACAC ACCCAAGATT TAAATCAGTA CACCACATCT
CTCGCCTCAG AAGATATTGA TGCCGCCAAG CTGAAAGAAT TGACCCATTC AGTATTGAAT
ACTGCTTCAT CCATGAAACA GTCCAGCGAA GAATTTCAAA AAGAAATGCT GAGCAGTAAT
GAAGAAATCC TTCGACTACG AAAAGAATTG ATTGAAGCAC GAGCCGAAAC CCTAACCGAT
GAATTGACCG AAGTTGGAAA TCGCAAAGCA TTCAACAATG CCATTCAAGA CTTAGCGGAC
AGTACGCAAG ACAACCCGCA AAGTTTGGTT TTGATTTTAA CCGACATTGA TCATTTCAAA
CGCTTTAACG ATACGTTTGG CCATTTGGTT GGCGACAGTG TTCTCAGGTA TTTCGCCAAC
TTGATGAAAA AAACCAGAGA CGACACCGAA ACCGTTTGCC GTTATGGGGG CGAAGAGTTT
GCGATTCTGT TATCCCATAG CAGCCTTGAA AAAGCGAAAG AGCGAGCCGA ATCCATTCGA
CACAGCTTGG AAACGGCCAA ACTTAAACGT AAAGATTCGG AAAAAACATT AGGAAAAATC
ACCGCTTCAT TTGGGGTAGC CGTTTACAAA GGTGAAGACC ATGAAACGAT TGACGACTGG
ATTAAACGTG CGGATGATGC ACTTTATGAA GCGAAAAACC AAGGTCGAAA CCGAATCATT
ACGGATGAAG AGTTGGAAGC CACTTCGACG TCAAATTAG
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| Protein sequence | MLIDIKDVPE KAQRIFVQLI DIFEEQDINP TPLNYYIWYQ YYKGDHPKFR QEMDNALQDP
FGYNDRLGRR LYDEYFSDEK SNNDFDRAFK RLINLVIKKM NVWSDKLEKH TQDLNQYTTS
LASEDIDAAK LKELTHSVLN TASSMKQSSE EFQKEMLSSN EEILRLRKEL IEARAETLTD
ELTEVGNRKA FNNAIQDLAD STQDNPQSLV LILTDIDHFK RFNDTFGHLV GDSVLRYFAN
LMKKTRDDTE TVCRYGGEEF AILLSHSSLE KAKERAESIR HSLETAKLKR KDSEKTLGKI
TASFGVAVYK GEDHETIDDW IKRADDALYE AKNQGRNRII TDEELEATST SN
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