| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_0175 |
|---|
| Symbol | |
|---|
| ID | 3762486 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thiomicrospira crunogena XCL-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007520 |
|---|
| Strand | + |
|---|
| Start bp | 208897 |
|---|
| End bp | 209856 |
|---|
| Gene Length | 960 bp |
|---|
| Protein Length | 319 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 637784880 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_390445 |
|---|
| Protein GI | 78484520 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3528] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATTGGC GTACGCTCAT TCTTTGGGTC AGTTTGACCA GTACCGTATT GACGGGCCCT
CTAGCGTCGG CTGGCCAAAT CAATATTCAA TTAGATAACG ACGTTGTGTT TGGAACCGAT
CGGCAATACA CCGGTGGGTT TGAAGTTCGT TGGACAGAAG ATCAAATCCC TTTGGTGGAC
GCATTACTGT CTCCTTTTGA ATCGTTTTTG CCAAGTAAAA ATATTTCCGG TTTCAAACAG
GCTGACCAAC TTGCGGTGTG TACAGAACTC TATACCTTGC AACAAAAAAC CGAATACGGT
AATGAAGCCG TCAGTAACTC GGCCTGGACG CATATCGATT GGCGTCGTTT TTATTGGTAT
GGTAAAAACC AATCCATTTT GGATTTTCGA GCTGGTTGGA TTGGGCCAAG CAGCGGTGGG
CGACAAATTC AAGATGGTAT TCATTCCTTA ATAGGAAATG ACAATGCGTC AGGGTGGGAC
AAACAAGTGC CTGATCAGCC TACGTTGCAA GTAGGGTTTG AAAACCGGCA TAAATTTTTT
ACAACACAAG ATGACGGATT TAAAGTAGCG CACTCGTTGT CTGGCGTGGT GGGTTCTCCT
GAAATTTATG CCGCGGCTGG AGTCGGCATG CAATATGGCG TCAATATGGA AGCGGTGATG
AGTTTTAACC GCTTAAATCA TTTGGTCATC CCTGAAAAAG GGTTTGGCTG GCTGGTCTTT
ATGGATGCCT CGGTTCGGTA TGAAGCCTAT AATGCGTTTC GGGATGGACG TTTATTTATT
GATGAAAGGA CCCGGCTAAA ACCAGCAAAT GATTTAATTC CATCCGTTCA GTATGGCGCG
GGCTTTGTTT TTAATGAAAT TTCAGTGGTC TTGTCAGGCA GCTCTTTTGG TAAGTTTTAC
CGAGAGCAGA CCGAAGATGT CTTTCGTTTT GCGTCATTGA TTGTTTCTTT TTCTATATAA
|
|---|
| Protein sequence | MNWRTLILWV SLTSTVLTGP LASAGQINIQ LDNDVVFGTD RQYTGGFEVR WTEDQIPLVD
ALLSPFESFL PSKNISGFKQ ADQLAVCTEL YTLQQKTEYG NEAVSNSAWT HIDWRRFYWY
GKNQSILDFR AGWIGPSSGG RQIQDGIHSL IGNDNASGWD KQVPDQPTLQ VGFENRHKFF
TTQDDGFKVA HSLSGVVGSP EIYAAAGVGM QYGVNMEAVM SFNRLNHLVI PEKGFGWLVF
MDASVRYEAY NAFRDGRLFI DERTRLKPAN DLIPSVQYGA GFVFNEISVV LSGSSFGKFY
REQTEDVFRF ASLIVSFSI
|
|---|
| |