Gene Tcr_0174 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_0174 
Symbol 
ID3762485 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp208120 
End bp208884 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content47% 
IMG OID637784879 
Producthypothetical protein 
Protein accessionYP_390444 
Protein GI78484519 
COG category[R] General function prediction only 
COG ID[COG0730] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTTTAG CTTGGATTGG TGCTCTCTTT ATTGGCTTGA GTCTTGGTCT GTTAGGCTCG 
GGCGGCTCTA TTTTAACAGT ACCAGTATTG GTTTATGTGG TGGGGCAGGA TCCAAAGGTC
GCTATTGCCG GCTCTTTGAT GATTGTCGGA ATCATCAGTG TGTTCTCCGC ACTGCCGTAC
GCTCGACAAG GGCTGGTCAA GTGGCGAACC GTCTTTATTT TTGGAATACC CGGCATGTTA
GGGGCCTTTG TGGGAGCTTG GGGCGCGCAT TATGTATCAA ACGCTATGCA GATGCTAATT
TTTTCAGCCT TGTTGTTGTC CGCAGCCTAT CTGATGTTTC GGCCGGTTAA ATTAGAGGAA
GATACTCCAA CTCAAGAACG TGCTATTTAT AAAATTGCCT TAGATGGGTT GGCGGTCGGA
GCTGTGACGG GGCTTGTTGG TGTTGGCGGT GGCTTTCTGA TTATTCCAGC ACTGGTGCTG
CTCGGAGGTT TGTCCATGCG ATTGGCGGTT GGCACCAGTC TGGTGATTAT CGCAGCGAAA
TCCTTTGTCG GTTTTTATGA ATATCTGCAT GTTTTGGAGT CGCTGGCGTT ATCGATCGAT
TGGTATGTTA TTGGTATGTT CTCTGCGATT GGTATTGTCG GGGGCTGGTT AGGTCACCGT
GTCAGCAATC GGGTTAATCA GGCCATGTTG AAACGAATTT TTGCATTTTT CCTAGTGATT
ATGGGGGCAT ATATTCTGTA TAAAAATATG CCATCTCTTT TCTAA
 
Protein sequence
MILAWIGALF IGLSLGLLGS GGSILTVPVL VYVVGQDPKV AIAGSLMIVG IISVFSALPY 
ARQGLVKWRT VFIFGIPGML GAFVGAWGAH YVSNAMQMLI FSALLLSAAY LMFRPVKLEE
DTPTQERAIY KIALDGLAVG AVTGLVGVGG GFLIIPALVL LGGLSMRLAV GTSLVIIAAK
SFVGFYEYLH VLESLALSID WYVIGMFSAI GIVGGWLGHR VSNRVNQAML KRIFAFFLVI
MGAYILYKNM PSLF