Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tcr_0174 |
Symbol | |
ID | 3762485 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiomicrospira crunogena XCL-2 |
Kingdom | Bacteria |
Replicon accession | NC_007520 |
Strand | + |
Start bp | 208120 |
End bp | 208884 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637784879 |
Product | hypothetical protein |
Protein accession | YP_390444 |
Protein GI | 78484519 |
COG category | [R] General function prediction only |
COG ID | [COG0730] Predicted permeases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 44 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTTTAG CTTGGATTGG TGCTCTCTTT ATTGGCTTGA GTCTTGGTCT GTTAGGCTCG GGCGGCTCTA TTTTAACAGT ACCAGTATTG GTTTATGTGG TGGGGCAGGA TCCAAAGGTC GCTATTGCCG GCTCTTTGAT GATTGTCGGA ATCATCAGTG TGTTCTCCGC ACTGCCGTAC GCTCGACAAG GGCTGGTCAA GTGGCGAACC GTCTTTATTT TTGGAATACC CGGCATGTTA GGGGCCTTTG TGGGAGCTTG GGGCGCGCAT TATGTATCAA ACGCTATGCA GATGCTAATT TTTTCAGCCT TGTTGTTGTC CGCAGCCTAT CTGATGTTTC GGCCGGTTAA ATTAGAGGAA GATACTCCAA CTCAAGAACG TGCTATTTAT AAAATTGCCT TAGATGGGTT GGCGGTCGGA GCTGTGACGG GGCTTGTTGG TGTTGGCGGT GGCTTTCTGA TTATTCCAGC ACTGGTGCTG CTCGGAGGTT TGTCCATGCG ATTGGCGGTT GGCACCAGTC TGGTGATTAT CGCAGCGAAA TCCTTTGTCG GTTTTTATGA ATATCTGCAT GTTTTGGAGT CGCTGGCGTT ATCGATCGAT TGGTATGTTA TTGGTATGTT CTCTGCGATT GGTATTGTCG GGGGCTGGTT AGGTCACCGT GTCAGCAATC GGGTTAATCA GGCCATGTTG AAACGAATTT TTGCATTTTT CCTAGTGATT ATGGGGGCAT ATATTCTGTA TAAAAATATG CCATCTCTTT TCTAA
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Protein sequence | MILAWIGALF IGLSLGLLGS GGSILTVPVL VYVVGQDPKV AIAGSLMIVG IISVFSALPY ARQGLVKWRT VFIFGIPGML GAFVGAWGAH YVSNAMQMLI FSALLLSAAY LMFRPVKLEE DTPTQERAIY KIALDGLAVG AVTGLVGVGG GFLIIPALVL LGGLSMRLAV GTSLVIIAAK SFVGFYEYLH VLESLALSID WYVIGMFSAI GIVGGWLGHR VSNRVNQAML KRIFAFFLVI MGAYILYKNM PSLF
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