| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_0142 |
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| Symbol | |
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| ID | 3762434 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiomicrospira crunogena XCL-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007520 |
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| Strand | - |
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| Start bp | 174845 |
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| End bp | 175609 |
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| Gene Length | 765 bp |
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| Protein Length | 254 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637784847 |
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| Product | HAD family hydrolase |
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| Protein accession | YP_390412 |
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| Protein GI | 78484487 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0647] Predicted sugar phosphatases of the HAD superfamily |
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| TIGRFAM ID | [TIGR01458] HAD-superfamily subfamily IIA hydrolase, TIGR01458
[TIGR01460] Haloacid Dehalogenase Superfamily Class (subfamily) IIA |
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Plasmid Coverage information |
| Num covering plasmid clones | 43 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACTTCTC CTTCCATCCA AAATATTAAA GCCGTATTAT TTGATCTAAG CGGTGTTCTC
TATATCGGCA CGGATGCCCT CCCTGGTGCG GTTGAAACGG TACATCGTCT AAAACAACAA
GGTTTTATTC TGCGTTTTGT AACCAATACA GCCAGTCAAC CCAGTGAAAT GATTTTACGA
CAACTGAACC AGCTTGGATT TGACGTGGAA GAAGCGGAAC TTTATACCGC ACCGAAAGCC
GCCAAACAGT ATCTTTTACA CCATCAACTT CGGCCATACT GCTTAATCCA TACATTGTTA
AAAGCCGAAT TTAAAGACAT CGATCAAACC AATCCAAATT GCGTATTGCT GGGAGATGCT
CAAGACGACT TAACCTATCA AAGCTTGAAC AAGGCCTTCA ATTTGGTTGA AAAGGGTTAC
CCATTAATTG GTATTGGCAA AAATAAATAT TACAAAGATG CCGAAGGCTT CAAACTGGAC
GCAGGTACGT TTATTCATGC TTTGGAATGG GCCAGTGATA CACACGCCAT TATCACCGGA
AAACCGGATA AGACTTTTTT TGACGAGGTC GTGGCTTCTA CAGGTGTGCC TGCGACTCAA
TGCTTGATGA TTGGTGACGA TGTTCGTGGT GATGTTGAAG GCGCCATTAA CGCGGGCTTG
CAGGCGGCGT TGGTTCGAAC AGGAAAATTC AAACCCAGCG ATGAAAAAAT TCTGCCTGAT
ACAGCCTGGA TACTGGATGG CATTCAAAAG CTTTCCTTAT CATAA
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| Protein sequence | MTSPSIQNIK AVLFDLSGVL YIGTDALPGA VETVHRLKQQ GFILRFVTNT ASQPSEMILR
QLNQLGFDVE EAELYTAPKA AKQYLLHHQL RPYCLIHTLL KAEFKDIDQT NPNCVLLGDA
QDDLTYQSLN KAFNLVEKGY PLIGIGKNKY YKDAEGFKLD AGTFIHALEW ASDTHAIITG
KPDKTFFDEV VASTGVPATQ CLMIGDDVRG DVEGAINAGL QAALVRTGKF KPSDEKILPD
TAWILDGIQK LSLS
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