Gene Tcr_0137 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_0137 
Symbol 
ID3762506 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp170257 
End bp171474 
Gene Length1218 bp 
Protein Length405 aa 
Translation table11 
GC content49% 
IMG OID637784842 
Producthypothetical protein 
Protein accessionYP_390407 
Protein GI78484482 
COG category[R] General function prediction only 
COG ID[COG2081] Predicted flavoproteins 
TIGRFAM ID[TIGR00275] flavoprotein, HI0933 family 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGTTGA AGACGACGAA TACCATAGAT GTGCTGATTA TCGGTGCAGG CGCTTCAGGA 
TTAATGTGTG CCGCCACAGC CGGTTATCGT GGACGGGACG TGTGGGTGCT GGATCATGCG
CCTAAAGCCG CCGCGAAAAT TCGGATTTCC GGCGGTGGGA AATGCAACTT TACCAATCAG
GTGGTGACCC CAAACGAGTT TATTTGTCAG AATCCGCACT TTGTGAAAAG CGCCTTGGCC
CGTTACCAGC CTCAGGATTT TATCGACTTG GTTGACCGGC ATGGGCTGGA ATATGAGGAG
CGGGAGCTGG GAAAGTTATT TTGCCGGCAT CGTGCCGGGG ACTTGATTCA TATTTTGAAA
ACCGAATGCG ATTGGGCCGG CGTGAGCCTC CAGTTAAGTA CGTCGGTACT CGCCATTACA
CAATTAACAC CAAAAGCAGC GCATGAGGTG GCGTTTCGAG TTGAAACAAA CGAGCGTTTT
ATTGAATGCC AATCGTTGGT TATTGCGACG GGTGCACTGT CTTTTCCCAA GCTCAAAGCG
AGTAATTTTG GTTATCAAGT TGCAGAACAG TTTGGCTTAA GGCAGATTCC TGCCCGTCCG
GGCTTGGTGC CATTGGTTTT TGACGGCAAA TGGCGAGCTT TTTGTCAAAA GCTGAGCGGA
ATTGCATTGG ATGTTAAAAT CAGCACCTCC AATGGACAGA CAGAAAAATC GTTTGAAGAA
GCCATGCTGT TTACTCATCA GGGCATCAGT GGGCCGGGCG TGTTGCAGAT TTCTAATTAT
TGGCAACCCG GTCAACCCAT TGAAATTAAT TTGTTGCCAA AGGTAGATGT TCTGACAGAG
TTGATGCAGT TAAAGCAGAG CAATGCGTCA TTAATGCGTT GGTTACAACA TTTCTGGACC
AAAAAATTTA CCCAGGCCTG GCTGGAAATG TACCCGATTG CGACAAAGCT GGCCGATTTG
CCCAACGAGG AGATTGAGCG CTTTGCACAG CAGATAACAC GCTGGACATT GTACCCAAGT
GATACCGCAG GCTACGATAA GGCGGAAGTA ACTTTAGGGG GGGTCGACAC GGATGAGGTG
TCGTCTAAAA ACTTTGAAGT TAAAAATGTG CCCGGGCTGT ACTTTATTGG TGAAGTGTTG
GATGTGACCG GTCATTTGGG AGGGTATAAC TTTCAGTGGG CTTGGTCGTC CGGGTTTGCA
GCCGGTCAAA CAGTGTAG
 
Protein sequence
MPLKTTNTID VLIIGAGASG LMCAATAGYR GRDVWVLDHA PKAAAKIRIS GGGKCNFTNQ 
VVTPNEFICQ NPHFVKSALA RYQPQDFIDL VDRHGLEYEE RELGKLFCRH RAGDLIHILK
TECDWAGVSL QLSTSVLAIT QLTPKAAHEV AFRVETNERF IECQSLVIAT GALSFPKLKA
SNFGYQVAEQ FGLRQIPARP GLVPLVFDGK WRAFCQKLSG IALDVKISTS NGQTEKSFEE
AMLFTHQGIS GPGVLQISNY WQPGQPIEIN LLPKVDVLTE LMQLKQSNAS LMRWLQHFWT
KKFTQAWLEM YPIATKLADL PNEEIERFAQ QITRWTLYPS DTAGYDKAEV TLGGVDTDEV
SSKNFEVKNV PGLYFIGEVL DVTGHLGGYN FQWAWSSGFA AGQTV