Gene Tcr_0133 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_0133 
Symbol 
ID3762502 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp166579 
End bp168153 
Gene Length1575 bp 
Protein Length524 aa 
Translation table11 
GC content45% 
IMG OID637784838 
Productmetal dependent phosphohydrolase 
Protein accessionYP_390403 
Protein GI78484478 
COG category[T] Signal transduction mechanisms 
COG ID[COG2206] HD-GYP domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.140491 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGCCT CTTTACTTGA AAAAATCGAA CAACTCAATC AAGTCGGCAT CGCACTTTCT 
GCTGAAAGCG ACACCCCCAC TCTCTTGCAA CAAATATTAA CCAGTGCACA AGCATTAACC
CACGCCGATG GCGGAACCTT ATATCGAGTG ATCGACCAAC AAATGCTCCA TTTTGACGTG
GTGCAAAACA CCTCTCTTGG GATTCAGCTC GGTGGAAATC ATCCAGAGCC GATTGCATTT
CCGGCGATCC CCTTAACACG GTCTTCGGGC GATGAAAACC TAACAACGGT TTCCAGCTAT
GTCGCCATCA AAGGTGAGAC GGTTAATATT AAAGATATCT ACGCCGATCA CGATTTTGAT
TTCTCTGGAG CGTTGGCATT TGACCAACAA GTCCATTACC GAACACAATC AATGCTGACC
ATTCCCCTGA AAAATTTCGA TCATGACGTC ATCGGCGTAT TGCAGCTGAT CAATGCAACC
GACCAGGAAG GACAAGTTAT CCCCTTCTCG GAAGAATCTG AAAGCTTAGC GCGCTCTTTA
GCTTCGCAGG CCTCTGTGGC CTTGACCAAT CGCCAGCTTA TTAATGAGCA TAAGCAGCTT
TTTGAGGCCT TCAGTAAAAT GGTGGCCGAC GCCATTGATA AAAAATCCCC TTATACCGGC
GAACACTGCC AAAGAGTTCC GGTCATAACC ATGATGCTGG CAGAAGCGGC TTCTCAATCA
AACCACCCTG ATTTTGAAAA TTTTCAGATG GATGAAAGCG ATTTGTTTGA ATTGGAAACG
GCGGCCTGGC TTCATGACTG CGGTAAGTTA ACGACACCTG AATACATTAT GGATAAATCC
ACTAAGCTGG AAACCGTCTT CGATCGCATT GAACTCATCA AAACCCGCTT AAACTTAAAG
GCGTTTCAAT CACTAGCCGA GCAATACGAG ATTCCTCTAG AAGACATTAA AGCCTCCCAA
AAAAAGCATT ACGAGCTTTA CCAGCGACTT CAGGACATCA ATATTGGCAA GGAATTCTTT
AATGAAGCGT CTGCGACATT TTTAAAAACC GTTCAATCTG AAACCTATCG CACACTGGAA
GGCTCTAAAC AGCCCATGTT GAATGAGGAT GAATTTCTTA ACCTAAACAT TTCCCGAGGC
ACGCTCAATG ATGAAGAGCG AACCATCATG CAGGATCATG CCGCCATGTC GATTCATATG
TTGGATATTT TGCCCTTTCC TAAGGAATTA CAACGCGTTT CTGAATACGC TGGCGGCCAC
CATGAAAGAA TGGATGGCAA AGGATATCCC AACCAACTGA CACGAGAAGA TCTTTCAATT
CCGGCTAGAA TCATGGGAAT TGCAGATATT TTTGAAGCCC TATCCGCTGG CGATCGGCCT
TATAAAAAAG CGAAAAGCCT TTCTGAGTGC TTACGTATTT TAGGGTTCAT GAAACAAGAC
GGCCATATTG ACCCGGATTT ATTCAATCTC TTTATCCGAG AAAAAGTCTA TTTGACTTAT
GCTAAGGCTT ATCTGAAACC CAGTCAGATC GATGAGGTGG ACCCCAATCA AATTCCTGGA
TATGAAGCAA CTTGA
 
Protein sequence
MNASLLEKIE QLNQVGIALS AESDTPTLLQ QILTSAQALT HADGGTLYRV IDQQMLHFDV 
VQNTSLGIQL GGNHPEPIAF PAIPLTRSSG DENLTTVSSY VAIKGETVNI KDIYADHDFD
FSGALAFDQQ VHYRTQSMLT IPLKNFDHDV IGVLQLINAT DQEGQVIPFS EESESLARSL
ASQASVALTN RQLINEHKQL FEAFSKMVAD AIDKKSPYTG EHCQRVPVIT MMLAEAASQS
NHPDFENFQM DESDLFELET AAWLHDCGKL TTPEYIMDKS TKLETVFDRI ELIKTRLNLK
AFQSLAEQYE IPLEDIKASQ KKHYELYQRL QDINIGKEFF NEASATFLKT VQSETYRTLE
GSKQPMLNED EFLNLNISRG TLNDEERTIM QDHAAMSIHM LDILPFPKEL QRVSEYAGGH
HERMDGKGYP NQLTREDLSI PARIMGIADI FEALSAGDRP YKKAKSLSEC LRILGFMKQD
GHIDPDLFNL FIREKVYLTY AKAYLKPSQI DEVDPNQIPG YEAT