Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tcr_0133 |
Symbol | |
ID | 3762502 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiomicrospira crunogena XCL-2 |
Kingdom | Bacteria |
Replicon accession | NC_007520 |
Strand | - |
Start bp | 166579 |
End bp | 168153 |
Gene Length | 1575 bp |
Protein Length | 524 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637784838 |
Product | metal dependent phosphohydrolase |
Protein accession | YP_390403 |
Protein GI | 78484478 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2206] HD-GYP domain |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.140491 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAACGCCT CTTTACTTGA AAAAATCGAA CAACTCAATC AAGTCGGCAT CGCACTTTCT GCTGAAAGCG ACACCCCCAC TCTCTTGCAA CAAATATTAA CCAGTGCACA AGCATTAACC CACGCCGATG GCGGAACCTT ATATCGAGTG ATCGACCAAC AAATGCTCCA TTTTGACGTG GTGCAAAACA CCTCTCTTGG GATTCAGCTC GGTGGAAATC ATCCAGAGCC GATTGCATTT CCGGCGATCC CCTTAACACG GTCTTCGGGC GATGAAAACC TAACAACGGT TTCCAGCTAT GTCGCCATCA AAGGTGAGAC GGTTAATATT AAAGATATCT ACGCCGATCA CGATTTTGAT TTCTCTGGAG CGTTGGCATT TGACCAACAA GTCCATTACC GAACACAATC AATGCTGACC ATTCCCCTGA AAAATTTCGA TCATGACGTC ATCGGCGTAT TGCAGCTGAT CAATGCAACC GACCAGGAAG GACAAGTTAT CCCCTTCTCG GAAGAATCTG AAAGCTTAGC GCGCTCTTTA GCTTCGCAGG CCTCTGTGGC CTTGACCAAT CGCCAGCTTA TTAATGAGCA TAAGCAGCTT TTTGAGGCCT TCAGTAAAAT GGTGGCCGAC GCCATTGATA AAAAATCCCC TTATACCGGC GAACACTGCC AAAGAGTTCC GGTCATAACC ATGATGCTGG CAGAAGCGGC TTCTCAATCA AACCACCCTG ATTTTGAAAA TTTTCAGATG GATGAAAGCG ATTTGTTTGA ATTGGAAACG GCGGCCTGGC TTCATGACTG CGGTAAGTTA ACGACACCTG AATACATTAT GGATAAATCC ACTAAGCTGG AAACCGTCTT CGATCGCATT GAACTCATCA AAACCCGCTT AAACTTAAAG GCGTTTCAAT CACTAGCCGA GCAATACGAG ATTCCTCTAG AAGACATTAA AGCCTCCCAA AAAAAGCATT ACGAGCTTTA CCAGCGACTT CAGGACATCA ATATTGGCAA GGAATTCTTT AATGAAGCGT CTGCGACATT TTTAAAAACC GTTCAATCTG AAACCTATCG CACACTGGAA GGCTCTAAAC AGCCCATGTT GAATGAGGAT GAATTTCTTA ACCTAAACAT TTCCCGAGGC ACGCTCAATG ATGAAGAGCG AACCATCATG CAGGATCATG CCGCCATGTC GATTCATATG TTGGATATTT TGCCCTTTCC TAAGGAATTA CAACGCGTTT CTGAATACGC TGGCGGCCAC CATGAAAGAA TGGATGGCAA AGGATATCCC AACCAACTGA CACGAGAAGA TCTTTCAATT CCGGCTAGAA TCATGGGAAT TGCAGATATT TTTGAAGCCC TATCCGCTGG CGATCGGCCT TATAAAAAAG CGAAAAGCCT TTCTGAGTGC TTACGTATTT TAGGGTTCAT GAAACAAGAC GGCCATATTG ACCCGGATTT ATTCAATCTC TTTATCCGAG AAAAAGTCTA TTTGACTTAT GCTAAGGCTT ATCTGAAACC CAGTCAGATC GATGAGGTGG ACCCCAATCA AATTCCTGGA TATGAAGCAA CTTGA
|
Protein sequence | MNASLLEKIE QLNQVGIALS AESDTPTLLQ QILTSAQALT HADGGTLYRV IDQQMLHFDV VQNTSLGIQL GGNHPEPIAF PAIPLTRSSG DENLTTVSSY VAIKGETVNI KDIYADHDFD FSGALAFDQQ VHYRTQSMLT IPLKNFDHDV IGVLQLINAT DQEGQVIPFS EESESLARSL ASQASVALTN RQLINEHKQL FEAFSKMVAD AIDKKSPYTG EHCQRVPVIT MMLAEAASQS NHPDFENFQM DESDLFELET AAWLHDCGKL TTPEYIMDKS TKLETVFDRI ELIKTRLNLK AFQSLAEQYE IPLEDIKASQ KKHYELYQRL QDINIGKEFF NEASATFLKT VQSETYRTLE GSKQPMLNED EFLNLNISRG TLNDEERTIM QDHAAMSIHM LDILPFPKEL QRVSEYAGGH HERMDGKGYP NQLTREDLSI PARIMGIADI FEALSAGDRP YKKAKSLSEC LRILGFMKQD GHIDPDLFNL FIREKVYLTY AKAYLKPSQI DEVDPNQIPG YEAT
|
| |