Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tcr_0113 |
Symbol | |
ID | 3762521 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiomicrospira crunogena XCL-2 |
Kingdom | Bacteria |
Replicon accession | NC_007520 |
Strand | + |
Start bp | 143466 |
End bp | 144260 |
Gene Length | 795 bp |
Protein Length | 264 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637784818 |
Product | uroporphyrinogen III methylase |
Protein accession | YP_390383 |
Protein GI | 78484458 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1587] Uroporphyrinogen-III synthase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCAAGC CTGATCCGGT TCTGACCTTT TTAAATACCC GTCCGGTTGA ACAGGCCGAG GCCTTGTCAC AATCGGTTCG GGAAAAAGGG CATCAGGTGT TGGCCTGCCC AACATTAAAA ATTTGTCCAC GTTCATTGCC GCAACAAGCT GGCGTCACGT TGTCGACCTT CGATAAGGTG TTTTTTATCA GCCAAAATGC GGTAAAGCAA TTTGTAGACA TGTGGCAATC GGCTTATCAG ACGCATCCGG TTTTTGCAGA AAAGACAGAG TGTTTCGCCA TTGGTCAAAG CACCTACAAT GCGATGAAGG CACTTGATTG GCCCGTTGCT AAAGTGCACT CGAATCAATA CGTCACCGAG GCTTTGCTGC AATCCGAAGT CTTACAAAAC TTGACCGATC AACAATGTTT GATTGTGAAA GGAAAAGGTG GTCGCCCCAC ATTGGCAGAA GGACTGATAG CCGCGGGGGC GACAGTAACG GAATGGGCGG TCTATGAAAG AGTGCCTGCG GATTTTTGTG ACGCGCAATG GCAAGTCTTT CGATCCGCGC GTCACCCAGT ATTGCTTATC AGCAGCCTGG ATGCGTGGTA CGGTTTGGAA AAAATGTTAA AAAACAGTGG GTATGGAAGT AAAAATGACC AGGCCTGGCT CTTTTTACAA GATGTGATTG TGTTTAGTGA CCGCATTAAA CACGCGTTAC AGCAGCAGGA ATGGCAAGGG CGTTTATTTG TGGTTCCACA GCAAAGTAAC GCCGGCATAT TAACCGCTCT AGAGCAAATC TCAATTGAAC GCTGA
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Protein sequence | MTKPDPVLTF LNTRPVEQAE ALSQSVREKG HQVLACPTLK ICPRSLPQQA GVTLSTFDKV FFISQNAVKQ FVDMWQSAYQ THPVFAEKTE CFAIGQSTYN AMKALDWPVA KVHSNQYVTE ALLQSEVLQN LTDQQCLIVK GKGGRPTLAE GLIAAGATVT EWAVYERVPA DFCDAQWQVF RSARHPVLLI SSLDAWYGLE KMLKNSGYGS KNDQAWLFLQ DVIVFSDRIK HALQQQEWQG RLFVVPQQSN AGILTALEQI SIER
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