Gene Tcr_0113 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_0113 
Symbol 
ID3762521 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp143466 
End bp144260 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content48% 
IMG OID637784818 
Producturoporphyrinogen III methylase 
Protein accessionYP_390383 
Protein GI78484458 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1587] Uroporphyrinogen-III synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCAAGC CTGATCCGGT TCTGACCTTT TTAAATACCC GTCCGGTTGA ACAGGCCGAG 
GCCTTGTCAC AATCGGTTCG GGAAAAAGGG CATCAGGTGT TGGCCTGCCC AACATTAAAA
ATTTGTCCAC GTTCATTGCC GCAACAAGCT GGCGTCACGT TGTCGACCTT CGATAAGGTG
TTTTTTATCA GCCAAAATGC GGTAAAGCAA TTTGTAGACA TGTGGCAATC GGCTTATCAG
ACGCATCCGG TTTTTGCAGA AAAGACAGAG TGTTTCGCCA TTGGTCAAAG CACCTACAAT
GCGATGAAGG CACTTGATTG GCCCGTTGCT AAAGTGCACT CGAATCAATA CGTCACCGAG
GCTTTGCTGC AATCCGAAGT CTTACAAAAC TTGACCGATC AACAATGTTT GATTGTGAAA
GGAAAAGGTG GTCGCCCCAC ATTGGCAGAA GGACTGATAG CCGCGGGGGC GACAGTAACG
GAATGGGCGG TCTATGAAAG AGTGCCTGCG GATTTTTGTG ACGCGCAATG GCAAGTCTTT
CGATCCGCGC GTCACCCAGT ATTGCTTATC AGCAGCCTGG ATGCGTGGTA CGGTTTGGAA
AAAATGTTAA AAAACAGTGG GTATGGAAGT AAAAATGACC AGGCCTGGCT CTTTTTACAA
GATGTGATTG TGTTTAGTGA CCGCATTAAA CACGCGTTAC AGCAGCAGGA ATGGCAAGGG
CGTTTATTTG TGGTTCCACA GCAAAGTAAC GCCGGCATAT TAACCGCTCT AGAGCAAATC
TCAATTGAAC GCTGA
 
Protein sequence
MTKPDPVLTF LNTRPVEQAE ALSQSVREKG HQVLACPTLK ICPRSLPQQA GVTLSTFDKV 
FFISQNAVKQ FVDMWQSAYQ THPVFAEKTE CFAIGQSTYN AMKALDWPVA KVHSNQYVTE
ALLQSEVLQN LTDQQCLIVK GKGGRPTLAE GLIAAGATVT EWAVYERVPA DFCDAQWQVF
RSARHPVLLI SSLDAWYGLE KMLKNSGYGS KNDQAWLFLQ DVIVFSDRIK HALQQQEWQG
RLFVVPQQSN AGILTALEQI SIER