| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_0109 |
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| Symbol | |
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| ID | 3762517 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiomicrospira crunogena XCL-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007520 |
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| Strand | + |
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| Start bp | 138775 |
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| End bp | 140160 |
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| Gene Length | 1386 bp |
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| Protein Length | 461 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637784814 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_390379 |
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| Protein GI | 78484454 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGGTTAC CTCGTTTAAC CCGCAGTATC TTTCTAGATC AATTCATTTT CATGCAGCTG
GTTGGGGTTC TTATTGGGCT GGCCTTTCCC CATTTTTTAG TTTGGTATGG TTTCCATGCG
GAAGAGGTCA TGACCGTTGA CTTCTATATT GTTTCGCAAA TCGCCGGGCA GATGGTCGGG
CTGATCAGTT TCATCTTAAT CTCTATGGTC ATTCGTCCTC ATTTGAAGCT GCTTTCGCAC
AAAATGCATG AGATTGCCGA AGGGCTTCAG CAAAAAACGT TTCATGAACA AACCAGTCGA
TGTGAAGAAG AGCTTTGCCA AATCGAGGTG GTATCCGATG ATGAGATTGG GGTGAGTGCA
AAAGCTTACA ACAAAATGTT GGAGGCCTTG ATTCAGGCGC ATGAAGTGGA AAGAGTGTTT
AATCGATTTT CAAAGGTCAT GTCCGAAAAC CTGGAGCTCT CGCGCTTGGC CGATGAGACG
TTGGCGTTGC TGATTCAGTC TACCAATATT GAAGCCGGCG CCGTGTTGGT GACTAAAAAT
GGCGTGCTTG AAGTGGGGGC CTCGCGAGGC ATTCTCGATG CTGAGAGTTT GGTGAAACAT
GATGTCATCA ATAAAGCCAT TAAAGATGGT CAGCAAGTGC GAATTGAGCT GCCAAAAAAT
ATTGATTTGG ACGGTGTTCT GGCGCAATTC AAACCGTCAG AAGTGTTTAT CGAACCGTTA
GAGTTTAAAG GCACAAACCT GGGCGTTTTA GTGGCCGCTA CTGGCGCGAT GGTGGCGGAT
GAAAGAACCG ATCAGCTGGT GCAACTGTTC AGTCGCAGCA TTGGTTTGGC TATTAATAAC
GCGATGATCC ATTCAAAATT CCAGAAAATG GCGGCAATTG ACAGTCTAAC CGCGATTTAT
AACCGTCGTT TTGGGATGGA TAGATTACGA GAAGACTTCT CTCGTGCCGT GCGTGAACAA
TCCAGTTTGA GTTTGGCGAT GGTCGATATC GATCACTTTA AGTCCGTTAA CGATACGTAC
GGTCATTTAG TAGGAGACAA AGCCATTAAA CTGATTGCCA CCATTATTAA AAAGACCTTA
CGAGAAGGTG ATATTGTGGT GCGTTATGGC GGTGAGGAGT TCTTGATGAT TTTACATGGC
GCTTCTTCGA CCAATGCGCG TAATGTGTGC GAACGGATTC GTCATCAGGT AAAAGACACT
TTCTTTAAAG AAGGCAATCA GCAAATTCAA TTAACGGTCA GTATCGGGAT CGCTGCTTAC
CCAGAACAAC AGGCCGGTGA TGAGATGGCT TTGATTCATA TGGCCGATCA AGCGTTATAT
TATGCCAAAG AAGGTGGCCG TAACCGAGTG GTTCCTTTCC GGAAAGTGAA TGAAGAAGTC
GCTTAA
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| Protein sequence | MRLPRLTRSI FLDQFIFMQL VGVLIGLAFP HFLVWYGFHA EEVMTVDFYI VSQIAGQMVG
LISFILISMV IRPHLKLLSH KMHEIAEGLQ QKTFHEQTSR CEEELCQIEV VSDDEIGVSA
KAYNKMLEAL IQAHEVERVF NRFSKVMSEN LELSRLADET LALLIQSTNI EAGAVLVTKN
GVLEVGASRG ILDAESLVKH DVINKAIKDG QQVRIELPKN IDLDGVLAQF KPSEVFIEPL
EFKGTNLGVL VAATGAMVAD ERTDQLVQLF SRSIGLAINN AMIHSKFQKM AAIDSLTAIY
NRRFGMDRLR EDFSRAVREQ SSLSLAMVDI DHFKSVNDTY GHLVGDKAIK LIATIIKKTL
REGDIVVRYG GEEFLMILHG ASSTNARNVC ERIRHQVKDT FFKEGNQQIQ LTVSIGIAAY
PEQQAGDEMA LIHMADQALY YAKEGGRNRV VPFRKVNEEV A
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