Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tcr_0094 |
Symbol | |
ID | 3762228 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiomicrospira crunogena XCL-2 |
Kingdom | Bacteria |
Replicon accession | NC_007520 |
Strand | + |
Start bp | 120804 |
End bp | 122063 |
Gene Length | 1260 bp |
Protein Length | 419 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637784799 |
Product | major facilitator transporter |
Protein accession | YP_390364 |
Protein GI | 78484439 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.000000571011 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTCATC GATTAAATCC CTCAGAAAAT GCTCTTATTC ATGGTATTTC GGTTAATAAA CACCAGTTTT TGTTACAGCT CTTACAAATC TTTTTGGTTG GATTAACCAT CGGGATGATT CGTGTGGTGG TGCCAGGCTT GGCAGAATCT GAGTTTGGCT TGGCCGATAA AGCCTTTTTT CTATTGGCTT CTTTTGTGGT GGTCTTCGGA ATCATTAAAG CCGTGATGAA TTTGTTTGCT GGTAAGCTGA GTGAGCAGTA TGGTCGAAAA TCCGTCCTAA TTTGGGGATG GTTGGTGGCG CTGCCGGTGC CTTTTATTTT GTTGTATGCT CCGAGTTGGA ACTGGATTAT TTTTGCCACG GTTTTGCTGG GATTTAACCA GGGACTGGCT TGGTCCATGG CCTTGAACAG TAAATTGGAT TTAGCCAAAT CGACGCAAAA AGGTCTGGTC AACGGTGTAA ATGAGTTTTC AGGTTACGCT GCGGTTGGGG TGGCCGGCTT GGTCACCGCC TATTTTGTCG AATGGTTTGG GGCAAAAGAG GGGCTGTTTA TATTCAGTTT AAGTGTGATT CTGTTAGGGC TGGTTTTAGC CAAATGGTCC ATTAAAGAAA CCTTGCCTTG GGCGGCGTTA CATCACCAAA TGGCGAGCCA GAATGGCGAA GTGCATTCGG CAAAATCGTT AACGCAACTT TTTAAAATGG CCAGTTGGGA GAATGACTCC TTGGTCGCTA TCAACCAGGC AGGATTAATC GAAAAGTTTA CCGATGCGAT TGTTTGGATT TTCTTGCCGG TTTATTTTCT CTCGCAAGGG CTTTCCTTGA TCGAGGCCGG TGCCATTGTT GCGATTTACG GGGTGGTTTG GGGGGCAAGC CAACTGGTGA CTGGCCCTTT ATCCGATAAA ATCGGACGAA AAGGATTGAT CGTTTGGGGT ATGTGGTTGT GTGGTTTGGG CGTATTATCG ATCCCAATGA CGCAGGGGGT GATCTTATGG TCTATAGAAG CCGCTGTCAT TGGTCTCGGA ATGGCGATGC TTTACCCAAA TTTAGGGGCA GCCGTGGGAG ACTTTGCTCC GGCCCCTCAT CGGGCGAGTT TAATTGGTAT TTATCGATTC TGGCGTGACT CCGGCTATGC GTTTGGAGCC TTGGCAATGG GAATTCTGGC ACAATGGTCG CAAGACCTTT CGACACCCTT TTGGATGGTC GGTATTGCCA TGCTGCTGTC AGGGGCGTGG GTTCAAGTTA AAATCACCAA TCAACGTTAG
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Protein sequence | MTHRLNPSEN ALIHGISVNK HQFLLQLLQI FLVGLTIGMI RVVVPGLAES EFGLADKAFF LLASFVVVFG IIKAVMNLFA GKLSEQYGRK SVLIWGWLVA LPVPFILLYA PSWNWIIFAT VLLGFNQGLA WSMALNSKLD LAKSTQKGLV NGVNEFSGYA AVGVAGLVTA YFVEWFGAKE GLFIFSLSVI LLGLVLAKWS IKETLPWAAL HHQMASQNGE VHSAKSLTQL FKMASWENDS LVAINQAGLI EKFTDAIVWI FLPVYFLSQG LSLIEAGAIV AIYGVVWGAS QLVTGPLSDK IGRKGLIVWG MWLCGLGVLS IPMTQGVILW SIEAAVIGLG MAMLYPNLGA AVGDFAPAPH RASLIGIYRF WRDSGYAFGA LAMGILAQWS QDLSTPFWMV GIAMLLSGAW VQVKITNQR
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