| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_0035 |
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| Symbol | |
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| ID | 3760361 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiomicrospira crunogena XCL-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007520 |
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| Strand | + |
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| Start bp | 42903 |
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| End bp | 44597 |
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| Gene Length | 1695 bp |
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| Protein Length | 564 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637784741 |
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| Product | NifA subfamily transcriptional regulator |
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| Protein accession | YP_390306 |
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| Protein GI | 78484381 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3604] Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAACATG TTGAACATTT AGATATTGCA AATCAGTCAG AATATATTGT CATAAAAGAA
GCGGCTGAAC AAATTGAAAA GGCCTATGAA CCGCAAAAAG CCATTCATAC CATTCTCAGT
TTGATTTCAC GTCAAATGGG CTTAAATCGA GGACGAGTTT TGCTTCAAGA AAGCTCTTCA
GGCTTTCTTC ATACAGCCTA TGCCTATGGA CTGACCAAAG AAGAAATTGC GCAAGGTCGC
TTCGCAACCA GTGAAGGGGT TTCCGGCAAA GTCATGCACA CGGGAAGCCC CATTATTATT
GCTGATATTG ATCGCGAAGA TGACTATCTA TTCCGTACCG TCGATCGTTC AACGCTTCCC
TCTGAAACCG TCGCATTTAT CGCTACCCCG ATCATTCGAA ATGGCACCGT GGTCGGTGTT
CTAGCGGTCA ACCGTCTGGC CAAACGTTCA CGCTCTCTTG ATCGAGATTT AAGCGTTCTG
AAATTGATTT CCTTATTCAT CAGTGAAATC TTAGCTGTAC ACGCCATGAT TGAGCAAAAA
ACTCAGGTAT TAAAAGAAGA AAACGAGCAG CTTCGAGCCA TGGCACTCGG TCAGGGAAGT
CAATATGGCA TTATTGGAGA AAGTGCGTCA CTCAGAGCCG CCTTAAACAA GGTTGGCCGT
GCCACCAATA CTGCCGTCAC AGTTTTGCTA ACAGGAGAAT CAGGCACGGG GAAAGAGCGA
TTTTCTCGCA TGCTTCATTT GGCATCACAC CGACAAGACA ATCCTTTCAT TGCCATTAAC
TGTGCCGCGA TTCCAACAGA CTTACTGGAA TCTGAACTCT TTGGGCATGA AAAAGGGGCT
TTCACAGGCG CCACCCAGAC CAAACAGGGC AAAATCGAAC TCGCCAATAA CGGCACCCTA
TTCCTCGATG AAATCGGGGA CCTGGACTTC GGCCTGCAAG CCAAACTGTT GCGCGTGTTA
GAAGAGCGCT GCGTCACTCG TGTCGGCGCC ACCAAGCCGA TTCATGTGGA CACCCGAATT
ATTGTCGCTT CCCATAAAGA TTTACATGAA GCTGTTAACC AAGGTCATTT TCGGCTTGAT
TTATTTTATC GTCTCAATGT GTTTCCGATT GAGTTGCCAC CGCTTCGAGA GCGTGATGGC
GACATTCGAT TACTGGCCAG ACATTTTCTC AACCAAGCCA ATCAGGAATA CCATACCAGT
GCCATTTACG ACAAAGGCGC CATGGCATTC CTGGAAGATT ATGAATGGCC GGGCAACATC
CGCCAATTGG AAAATGTCGT GAAACGTTCT GTGCTGATGG CCGATAACGG TCGCTTAATT
TCAGCACGAT TGATTGAAAA AATCATTCAG GAAGAGAGCG CCATTATCCA TGGAGGCCAT
GTTAAACCTC TTGAAAATCA AATACCGACA TCCGTGAAAA CCGATTCTTG GAATACACAA
GAGAATGCTA TAAATAATTC CTTTCATCAG GAGGTTAATT CTACTGATGC TATCGGCAAT
AAAAATAGTA TGGCATGGGC ATACGATCAA TCTCTGATGA ATGATAAACG CGCCTATTGG
CGTGTTTCGG AAGAGGAATC AGAACAGTTA AAACAAGCCT TGGAAATGGC ACGTGGTAAC
AAAACTCGGG CCGCACTTCT ACTCAACATG ACTCCACGCC AATTCAGTTA CCGCATGAAA
AAACTGGATT TATAA
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| Protein sequence | MKHVEHLDIA NQSEYIVIKE AAEQIEKAYE PQKAIHTILS LISRQMGLNR GRVLLQESSS
GFLHTAYAYG LTKEEIAQGR FATSEGVSGK VMHTGSPIII ADIDREDDYL FRTVDRSTLP
SETVAFIATP IIRNGTVVGV LAVNRLAKRS RSLDRDLSVL KLISLFISEI LAVHAMIEQK
TQVLKEENEQ LRAMALGQGS QYGIIGESAS LRAALNKVGR ATNTAVTVLL TGESGTGKER
FSRMLHLASH RQDNPFIAIN CAAIPTDLLE SELFGHEKGA FTGATQTKQG KIELANNGTL
FLDEIGDLDF GLQAKLLRVL EERCVTRVGA TKPIHVDTRI IVASHKDLHE AVNQGHFRLD
LFYRLNVFPI ELPPLRERDG DIRLLARHFL NQANQEYHTS AIYDKGAMAF LEDYEWPGNI
RQLENVVKRS VLMADNGRLI SARLIEKIIQ EESAIIHGGH VKPLENQIPT SVKTDSWNTQ
ENAINNSFHQ EVNSTDAIGN KNSMAWAYDQ SLMNDKRAYW RVSEEESEQL KQALEMARGN
KTRAALLLNM TPRQFSYRMK KLDL
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