Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dde_3678 |
Symbol | |
ID | 3758665 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
Kingdom | Bacteria |
Replicon accession | NC_007519 |
Strand | - |
Start bp | 3639501 |
End bp | 3640901 |
Gene Length | 1401 bp |
Protein Length | 466 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637784600 |
Product | cell wall biosynthesis glycosyltransferase-like protein |
Protein accession | YP_390166 |
Protein GI | 78358717 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1083] CMP-N-acetylneuraminic acid synthetase [COG1215] Glycosyltransferases, probably involved in cell wall biogenesis |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCTAGCC AACCGCTTGT TACGGTCTAC ATCACCAATT ACAATTACGG CAGGTTTCTG CGTCAGGCTG TGGAAAGCGT GTTTGCCCAG ACCCTGCACG ATTATGAGCT GCTCATCATT GATGACGGTT CCACGGACGG GTCGCGCGAT ATCGTGCTGG AATATGAGGG GCGCCCCGGG GTGCGCGTAC TGCTGCAGCA GAACGCCGGG CTGAACCGCA CCAGCAACAC GGCCCTTGGC ATGGCACGCG GGCGGTACAT CATGCGGCTG GATGCCGATG ATTATCTGGC ACCCGAAGCG CTGGCCGTCA TGACGGATAT TCTGGAGCGC AACCCTTCCG TGGGGCTTGT CTTTCCCGAT TATTATTACG TTGATGAAAA CGGGGCCGTT ATCGGCAGAG AGATCCGCAA CGATTTCAAC GGCGGTGTTT CGCTGCCCGA TATGCCGGCG CACGGCGCGT GCACGCTTAT CAGGCGGTCA CATCTGCTGA GCGTGGGCGG CTATAGCGAA GAATTCCGCT GTCAGGACGG GTATGACCTG TGGTTGCGGT TTATTGAAAA GCACGATGTG CGCAACGTTA ACGAACCGTT GTTTTACTAT CGCCAGCATG GCGGCAGTCT GTCGGGCGAC CGCAGGATGA TTGTGGAAAC CCGCGCGCGC ATCAAAGAGG CGCATGCCCG CAGAAGCAAC CGGCCGGCCT GTCCCACACT GGCGTTTGTT CCTGTACGCG GGCTTTCCGT GGACCCCCAC TGTCTGGCGC TGGAGCAGCT GGGCGGCAGA ACGCTGCTGG ACTGGACGCT GGATGCCGCG CTGGAGGCAA CGCAGCTGTG CGGTGTGGCT GTCACCACGC CCGATGCGGC AGTGATGGAC CATGTGCGGC GGCGGTACGG CAGCGCTGTG CACATTGTGG AGCGTCCCAG AGCGTTTGCC CGCAGCAATA CCGCGCTGCA TGACACCCTG CAGCACGTGC TGGACAGTCT GCCTCTGCTG GCCCGTCAGG CCCGCGCCTG CATGATGCTG TCAGTGGAGA CGCCTTTCCG CAGCAGCCTG TACATTGACA AGGCCGTCAA TACGGCACGT ATTTTCGACG TTGATACGGT GATACCCGTC AACCCTGAGA ATGATCTTTT TTTCCGGCAT GACGGCACGG GGCTGCAGCT GGTTGGCAAC AATCAGCGTT ACGGCGGCAT GCGGTTCGAG CGTGAGTATC TTTTCCGTGC CGTGCCGGGG CTGCACCTGC TTACCCGCGG CTGGTACGAA AAAAGCCCGC ACTGGCTGGG CGACAGGGTG GGGCACATAG TGCTGGCAGG TGACGCGCTG CATGTGGTGT CTTCTGCGCG CGATCTGGCT GTTGCCGAAA CGTTGCTGCG TCTGGAGCGT GAACGTATAT GTGCGGAATA G
|
Protein sequence | MASQPLVTVY ITNYNYGRFL RQAVESVFAQ TLHDYELLII DDGSTDGSRD IVLEYEGRPG VRVLLQQNAG LNRTSNTALG MARGRYIMRL DADDYLAPEA LAVMTDILER NPSVGLVFPD YYYVDENGAV IGREIRNDFN GGVSLPDMPA HGACTLIRRS HLLSVGGYSE EFRCQDGYDL WLRFIEKHDV RNVNEPLFYY RQHGGSLSGD RRMIVETRAR IKEAHARRSN RPACPTLAFV PVRGLSVDPH CLALEQLGGR TLLDWTLDAA LEATQLCGVA VTTPDAAVMD HVRRRYGSAV HIVERPRAFA RSNTALHDTL QHVLDSLPLL ARQARACMML SVETPFRSSL YIDKAVNTAR IFDVDTVIPV NPENDLFFRH DGTGLQLVGN NQRYGGMRFE REYLFRAVPG LHLLTRGWYE KSPHWLGDRV GHIVLAGDAL HVVSSARDLA VAETLLRLER ERICAE
|
| |