| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_3450 |
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| Symbol | |
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| ID | 3758428 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007519 |
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| Strand | + |
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| Start bp | 3409221 |
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| End bp | 3412016 |
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| Gene Length | 2796 bp |
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| Protein Length | 931 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637784363 |
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| Product | DNA polymerase I |
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| Protein accession | YP_389938 |
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| Protein GI | 78358489 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0749] DNA polymerase I - 3'-5' exonuclease and polymerase domains |
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| TIGRFAM ID | [TIGR00593] DNA polymerase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCGAAGCA CGCAGACTCC GGCCGTGTAC CCGCGTCTTT TATACCATTA TGCTTTGGCA
GACTGCCTGC ACAGTTTACA GGACAGGGGG AAAATCGTTA CCATACCTGT CTTGCTTGCG
GCAGCCCCTG CGGTTCCCGC CAGACAATCC GGCACCAAAC GCTGTCGCCG GACAGCGAAA
ACATCATCGA GAATTACCAT GTCGCTCAAG GAACGCCTCG GCCTTGACAA GGAACCGGTC
TACCTCATCG ACGGTTCTGC ATTTATCTTC CGCGGTTTCT ACGCGTTTCA GAACATGCAG
CGCTCCGACG GTCTGCCCAC CAACGCCCTG TTCATCGTGC TGCGCATTCT TCTCAAGCTG
CTGCGAGAAG AGCAGCCAGC CTACGCAGCT TTTTTCATGG ACGGCAAAGG CCCCACTTTC
CGCCATGCCC TGTACGACCA GTACAAGGCC AACCGCTCTG CAACGCCGGA ACCTCTGGTA
CAGCAGCTGG ACCCCATCCG CCGCGGAGTC CGCTCGCTGG GCATCCCTCT GGAAGTCTCG
GACGGTTGCG AAGCCGACGA CTGCATTGCC TCGCTGGCGG CAAAGTTCAA AAGCGAACGG
CCAGTCATCA TTGTGGGTGC CGACAAAGAC TTGAAACAGT GCATCGACGA CAACGTGTAC
CTGTGGGATC CGGGAGCAAA GCAGGAAAAA CTGCTCGACC TTGCCGGCTT TACTGAGGAA
ACAGGACTTT CCCCGTCACA GTGGCCCGAT TTTCAGGCGG TGATAGGTGA TTCCAGCGAC
AATATTCCCG GTGTACCGGG TGTCGGCCCC AAAACAGCCG CCCAGATTTT TGCCGAATTT
CCCACGCTGG AAGCCATTCA GGAAAACGAA AAGGCACTGA AGCCGGGCGT GCAGAAAAAA
TTTGCCGGTC AGTGGGACAA CATATATCTG TACCGCCGCC TGACCACACT GGACACCGGC
CGCTGCACAA GCCTTGCCCT CAAAGACATG ACCGTGCAGT CAGTGGATGC AGACAACGCC
GCGGCGTTCC TCAGAGAATT TGAGCTGCGC ACACTGCTGC GGGAACTGCC TCAGAGCGTG
CCGGTGCGTC CTGCCCGGTC CGGTGCAGCC GCCATGCAGC AGGCCTCGCT ATTCGGAGAA
CCGCAGGCGG CCCCGCAGAT TCCCTCATTC AGTTCCGCAG ACCAGTTACC TGCCGTTTCG
GGCACGGTCG CCCTTGTACC CGCCGAAAAA GGCATCGCCG TAGCCTTTAA CGGCAACGAG
TACCTGTACA CCGGAAAACC GGAAGATCTG GCCGCCCATA TGGCGCAGAC CGGCGCAATC
AGCCGGATCA TCGCTCCCGA CGTCAAGGCG CTCTACCGCA GCCATACGTC ATGGCGGGCC
ATAGAGGTAC ACCGCTGGTT TGACCTCGGC CTCGCGGCAT ACCTGCTGAA CCCCGAAGAA
CGCGACTATT CATGGACAAG CCTTGCGCGC AGAGCCGAAG AATTCGGCAT TGACGCACAG
ACACCCGCCA CGCTGGCGCT GACGCTGGCA CAGGATGCCG CAGCCCGGCT TGAAGGCGTA
GGACTGAGCG CGCTGATGGA AGAGCTGGAA ATGCCGCTTA TTCCCGTGCT GGCAGACATG
GAGCTGCGCG GCATACGCAT CAACCGCGCA GAATTTTCAG GATTTCTTGC CGAAGTGCAG
AAGGAGCTTG ATCGGCTGAC ACAGGAAGTG TACGCCGTGG CCGGCGGCCA GTTCAACATC
CGCTCATCGC AGCAGCTGGG CGAACTGCTG TTCGGCACGC TGGGACTTAA AGCAGGCAGC
AAGACCAAAG GCGGTCAGGC ATCCACCAGT CAGGCCGTAC TGGAAAAACT GGCGGGCAAG
CACCCTGTCA TCGATACCAT TCTGGAATAC CGCAAGCTGG AAAAACTGCG CTCCACCTAT
CTGGAACCGC TGCCCAGACT GGCGCAGGAA AACGACCGCA TACATACCAC GTTCAACCAG
CTGGCCACGG CCACAGGCAG ACTTTCTTCA AGCCAGCCCA ACCTGCAGAA CATTCCCGTA
CGCGGTCCCA TGGGACAACG CATGCGCCGC TGCTTCACCG CCGCCCCGGG CAACAAACTG
GTGGCAGCGG ACTATTCGCA GATTGAACTC CGTGTACTGG CACATGTCTC CGCAGACCCC
ACACTCATTG AATCGTTCAC CCGCAATGAA GACATTCACA GCCGCACGGC AGGCCTGCTG
TACGATGTGA CCGCCGCGGA CGTGACACCC GACCAGCGCC GCAATGCAAA AACCATCAAC
TTCGGGCTGA TATACGGCAT GGGCCCCCAG AAGCTGGCGC AGGAACTTAA AGTGACACTG
AACGAAGCCA AAGAATTCAT CGAACGGTAT TTCAGCAAAC TTTCGCACCT GAAAGAATTT
TACGACAACG TGGAACAAAG TGCCCGCGAA CACGGTTTTG TCACCACACT GGCGGGCCGC
CGCAGGCTGC TGCCCGAAAT CCATTCGGAC AACAACCAGC TGCGGTCTCA GGCCCGCAGG
CAGGCCATCA ATACCGTGGT GCAGGGCAGT GCCGCCGATA TCATAAAAAT TGCCATGCTA
AAGGCCGCAG CGGACGAAAC CCTGCAGCAG CTGAACGCCG CGCTTATTCT GCAGGTGCAT
GACGAACTGC TGCTTGAAGC GCCTCAGGAC GCCGCAGAAG CCGCAGCAAA ACGTCTGGCA
GACATCATGT CGTCCGTGCG TCCCGGCGGC GCGGCACTGG ACGTTCCGCT GGCCGTGGAT
TACGGCATCG GCGACAACTG GGGTCAGGCG CACTAA
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| Protein sequence | MRSTQTPAVY PRLLYHYALA DCLHSLQDRG KIVTIPVLLA AAPAVPARQS GTKRCRRTAK
TSSRITMSLK ERLGLDKEPV YLIDGSAFIF RGFYAFQNMQ RSDGLPTNAL FIVLRILLKL
LREEQPAYAA FFMDGKGPTF RHALYDQYKA NRSATPEPLV QQLDPIRRGV RSLGIPLEVS
DGCEADDCIA SLAAKFKSER PVIIVGADKD LKQCIDDNVY LWDPGAKQEK LLDLAGFTEE
TGLSPSQWPD FQAVIGDSSD NIPGVPGVGP KTAAQIFAEF PTLEAIQENE KALKPGVQKK
FAGQWDNIYL YRRLTTLDTG RCTSLALKDM TVQSVDADNA AAFLREFELR TLLRELPQSV
PVRPARSGAA AMQQASLFGE PQAAPQIPSF SSADQLPAVS GTVALVPAEK GIAVAFNGNE
YLYTGKPEDL AAHMAQTGAI SRIIAPDVKA LYRSHTSWRA IEVHRWFDLG LAAYLLNPEE
RDYSWTSLAR RAEEFGIDAQ TPATLALTLA QDAAARLEGV GLSALMEELE MPLIPVLADM
ELRGIRINRA EFSGFLAEVQ KELDRLTQEV YAVAGGQFNI RSSQQLGELL FGTLGLKAGS
KTKGGQASTS QAVLEKLAGK HPVIDTILEY RKLEKLRSTY LEPLPRLAQE NDRIHTTFNQ
LATATGRLSS SQPNLQNIPV RGPMGQRMRR CFTAAPGNKL VAADYSQIEL RVLAHVSADP
TLIESFTRNE DIHSRTAGLL YDVTAADVTP DQRRNAKTIN FGLIYGMGPQ KLAQELKVTL
NEAKEFIERY FSKLSHLKEF YDNVEQSARE HGFVTTLAGR RRLLPEIHSD NNQLRSQARR
QAINTVVQGS AADIIKIAML KAAADETLQQ LNAALILQVH DELLLEAPQD AAEAAAKRLA
DIMSSVRPGG AALDVPLAVD YGIGDNWGQA H
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