| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_3398 |
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| Symbol | |
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| ID | 3758375 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007519 |
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| Strand | + |
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| Start bp | 3362885 |
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| End bp | 3364108 |
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| Gene Length | 1224 bp |
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| Protein Length | 407 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637784311 |
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| Product | phage integrase family site specific recombinase |
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| Protein accession | YP_389887 |
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| Protein GI | 78358438 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCAAAACT GGCACAAAAC TGGCACAGAT TTTTTAGGCA TATGTGCCTG GGAGGCTGTG
ATGACAAAAA CAAATTGGAT CAAGATTGAT CGAGGTATCC GCTATAAAGA ACACCCCACA
CGAAAACACG GGGTCAAGCC AGACAGATAT TTTGTGCTGC GTCACTCGTC AGAAGGCAAA
ATGCACCAAG AAGCTCTAGG CTGGGCATCT GAAGGAGTAA CGCTTGAAAA AGCCAGAATA
AGACTTGCAG AACTAAAAGA GGCTAAGCGC ACAGGCAGGG GCGCCACAAC TCTTGCCAGC
CAAAGACGGG CTCTACGTGA GGAAGAGGAA CGAAATAAAC AAGCGCAACA AGCGGCTAAA
GCCAGATTCA TAACCTCAGG TTCATTTTGG CATGAATATT ACTGGCCGAG CCAGAGCCAT
AAAGCGCAAG GCAGCCTCGA CGCCGAAAAA GCACTATGGG AAAAATGGCT CTGCCCCATC
ATAGGGCAAA TTCCACTGGC CACAACCACG ACAAAAGATC TGGAAGAAGT GAAAAGACGG
ATGATGAAAG CAGGGCGTGC CCCTGCTACC ATCAAATATG CCTTAGCACT GTTCTCTCAG
ATGTGGACTC TAGCCCAGAA CTACGGGATA GCAGACGGCA CATGTCCTGC AAAAAGGCTC
AAGCTCCCCG CAAGAGATAA CAAGAGACAG CGCTACTTGA AGCCAGCTGA AATAGACACA
CTCCTTTCGG CCTTACGGGA TAAGTCGCAA AAGACGCACG ACATAGCTCT CCTGTCACTG
GAGTGCGGCC TTCGCTTTGG AGAAATCGCC AACCTGCGTT GGGAAGATGT TGACCTTGAA
CATGAAAGAC TATTTATCCG CGATCCAAAA TCACGAAGGA ACAGATTCAC ATACATAAAC
CAAACGATAC GCAGCATGTT ATTACTAAAT AGACCAGATC GAGCTGGAGA TCTAATTTTT
CCTGACTATG AAGGCAAACC CATGGCAAGA GTTTCCAAAA CATTCGGACG TGTTGCTGAT
GAGCTCTTCA ATTCGGATGT AACGGACACC AGAAACCGGG TATGTTTTCA TACGTTACGA
CATACGTTTG CATCGCGACT TGTCGCCAAT GGAACTCCGC TTTATAATGT CAAAGAGCTG
TTAGGACATT CATCACTTGC CATGACGGAG CGGTATGCAC ACCTTGCTCC CGACTATTAC
AAAGCACTGA GCACCAAGGA ATAG
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| Protein sequence | MQNWHKTGTD FLGICAWEAV MTKTNWIKID RGIRYKEHPT RKHGVKPDRY FVLRHSSEGK
MHQEALGWAS EGVTLEKARI RLAELKEAKR TGRGATTLAS QRRALREEEE RNKQAQQAAK
ARFITSGSFW HEYYWPSQSH KAQGSLDAEK ALWEKWLCPI IGQIPLATTT TKDLEEVKRR
MMKAGRAPAT IKYALALFSQ MWTLAQNYGI ADGTCPAKRL KLPARDNKRQ RYLKPAEIDT
LLSALRDKSQ KTHDIALLSL ECGLRFGEIA NLRWEDVDLE HERLFIRDPK SRRNRFTYIN
QTIRSMLLLN RPDRAGDLIF PDYEGKPMAR VSKTFGRVAD ELFNSDVTDT RNRVCFHTLR
HTFASRLVAN GTPLYNVKEL LGHSSLAMTE RYAHLAPDYY KALSTKE
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