Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dde_3333 |
Symbol | |
ID | 3758310 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
Kingdom | Bacteria |
Replicon accession | NC_007519 |
Strand | + |
Start bp | 3317742 |
End bp | 3318440 |
Gene Length | 699 bp |
Protein Length | 232 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637784246 |
Product | ATPase |
Protein accession | YP_389822 |
Protein GI | 78358373 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4778] ABC-type phosphonate transport system, ATPase component |
TIGRFAM ID | [TIGR02324] phosphonate C-P lyase system protein PhnL |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTGTAA TGCTGGACGT GCAGAACGTG TGCAAAACAT TCACCCTGCA TAATCAGGGA GGAACACACA TCGCTGTCTT CAACAATCTT TCACTTCAGG TGCGGGCCGG AGAGTGCGTG GCGCTTTCCG GCCGGTCCGG TGCGGGCAAA TCCACCCTGC TGCGCTCGCT GTATGCAAAC TACAAACCCA CAGCCGGCTC CATCAGCGTG CTGCACCGCG GCACCATGGT GGATATTGTC CCGGCCCCGC CGCGCAAGGT GCTGGAAATC CGCAAATACA CCATAGGCTA TGTCAGCCAG TTTCTGCGCG TCATTCCGCG CGTTACCGCA CTGGATATAG TGGCGGCCGC CCGCAAAGAA GTGACGGGCC ATACGGCAGA AGCCCGGAAA CAGGCAGCCG AACTGCTGGA GCGCATGAAT ATTCCGCGCA GACTGTGGGA CATCGCACCC GCCACGTTTT CCGGCGGCGA ACAGCAGCGC GTGAACATCG CACGGGGATT TGCCGTGCCC TACCCCGTGC TGCTGCTGGA CGAGCCCACG GCATCGCTGG ACGGCGCCAA CAAGCAGATA GTGACAGAGC TGATACATGA GGCAAAGGCA CGCGGAACCG CCGTTGTGGG CATCTTTCAT GATGACGACG TGCGCGGTGC CGTGGCCGAC CGTGTTTTTG ACATGCAGAC CATGGAGATG GCGGCATGA
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Protein sequence | MTVMLDVQNV CKTFTLHNQG GTHIAVFNNL SLQVRAGECV ALSGRSGAGK STLLRSLYAN YKPTAGSISV LHRGTMVDIV PAPPRKVLEI RKYTIGYVSQ FLRVIPRVTA LDIVAAARKE VTGHTAEARK QAAELLERMN IPRRLWDIAP ATFSGGEQQR VNIARGFAVP YPVLLLDEPT ASLDGANKQI VTELIHEAKA RGTAVVGIFH DDDVRGAVAD RVFDMQTMEM AA
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