Gene Dde_3333 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_3333 
Symbol 
ID3758310 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand
Start bp3317742 
End bp3318440 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content60% 
IMG OID637784246 
ProductATPase 
Protein accessionYP_389822 
Protein GI78358373 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG4778] ABC-type phosphonate transport system, ATPase component 
TIGRFAM ID[TIGR02324] phosphonate C-P lyase system protein PhnL 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTGTAA TGCTGGACGT GCAGAACGTG TGCAAAACAT TCACCCTGCA TAATCAGGGA 
GGAACACACA TCGCTGTCTT CAACAATCTT TCACTTCAGG TGCGGGCCGG AGAGTGCGTG
GCGCTTTCCG GCCGGTCCGG TGCGGGCAAA TCCACCCTGC TGCGCTCGCT GTATGCAAAC
TACAAACCCA CAGCCGGCTC CATCAGCGTG CTGCACCGCG GCACCATGGT GGATATTGTC
CCGGCCCCGC CGCGCAAGGT GCTGGAAATC CGCAAATACA CCATAGGCTA TGTCAGCCAG
TTTCTGCGCG TCATTCCGCG CGTTACCGCA CTGGATATAG TGGCGGCCGC CCGCAAAGAA
GTGACGGGCC ATACGGCAGA AGCCCGGAAA CAGGCAGCCG AACTGCTGGA GCGCATGAAT
ATTCCGCGCA GACTGTGGGA CATCGCACCC GCCACGTTTT CCGGCGGCGA ACAGCAGCGC
GTGAACATCG CACGGGGATT TGCCGTGCCC TACCCCGTGC TGCTGCTGGA CGAGCCCACG
GCATCGCTGG ACGGCGCCAA CAAGCAGATA GTGACAGAGC TGATACATGA GGCAAAGGCA
CGCGGAACCG CCGTTGTGGG CATCTTTCAT GATGACGACG TGCGCGGTGC CGTGGCCGAC
CGTGTTTTTG ACATGCAGAC CATGGAGATG GCGGCATGA
 
Protein sequence
MTVMLDVQNV CKTFTLHNQG GTHIAVFNNL SLQVRAGECV ALSGRSGAGK STLLRSLYAN 
YKPTAGSISV LHRGTMVDIV PAPPRKVLEI RKYTIGYVSQ FLRVIPRVTA LDIVAAARKE
VTGHTAEARK QAAELLERMN IPRRLWDIAP ATFSGGEQQR VNIARGFAVP YPVLLLDEPT
ASLDGANKQI VTELIHEAKA RGTAVVGIFH DDDVRGAVAD RVFDMQTMEM AA