| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_3308 |
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| Symbol | |
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| ID | 3758285 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007519 |
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| Strand | + |
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| Start bp | 3294313 |
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| End bp | 3295743 |
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| Gene Length | 1431 bp |
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| Protein Length | 476 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637784221 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_389797 |
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| Protein GI | 78358348 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGCTCA AAACACGTCT CATCTCCGCA CTGGCGGCCA TTCTCATTAC CGTTTTTCTG
GCGACAAGCA TCATCAACTA TGTTGTCACC CGCAATGCAG TGCGTGACGA TCTGCTCCGC
TCCGCCCTGC CGCTGACCGG CAAAAACATT TATTCCGAAA TTCACAGTGC GCTCATGCGT
CCCCTTCTGG TGTCTTCGGC CATGGCCAAC GACACCTTTT TGCGCGACTG GGTGACCGGA
GGCGAACAGA ATGAGGACGC AGTGCGCCGG TATCTTTCCA GAATCAAAAA GGAATATGGC
TTTTTAAGCA CCTTTTTCGT TTCGGCGGTA ACCGACCGCT ATTACACACC GGACGGCATT
CTGAAAAAAA TCGGTCCGCG CGACCCGCAT GATGTGTGGT TCTACGCATT CACACGGTAC
AAAGAGCCAT ACGACCTTGA TATCGACGTC AATCAGGCTG CCGGCAACAC CATGACCGTG
TTTGTAAACT TCCGCCTTGA AGACGACCGC GGCAGGCTGC TGGGCGTTAC CGGGGCAGGC
ATAGCGCTGG ATAAGGCTCT GGAGCTGCTG GATGAAGCAC AGCGCACGTA TCTGCGTCAG
GCCTTCCTCA TCGATCAGGA CGGGTTGATA CAGATACATC CCGACACGTC ACTGGTGGAA
AAAGCCTACA TAACCGAAAT GGACGGGCTG CGTGACATTG CGCCGGACAT ACTGGCAGGT
CAGGGCGATG CAGTCAGCCT GCAGTACGAC GCCGGCGGCA GACATTATCT GCTTACGTCG
CGCTATATCC CTGAATTCAA ATGGCATCTG CTGGTGGTGC AGGATGAAAT GACAGCCCTG
CGCACGGCCA GAGGCAACTT CATGCGCACG CTGGCCATGG GGTTTGTCTC CACACTTGTC
ATACTGGCCC TGTGCGTGCT GGCGGTTAAC AAATATCAGG CACGCATAGA GCATCTTGCC
AGAACAGACC CGCTGACAGG AGCAGCCAAC CGCCGCGAGC TGGAGGAACG CTTTGACCTG
GCCGCATACA GGGCATCGCG CGACGGAATC CCCTTCTCCA TACTGATCAT CGATCTGGAC
GGTTTCAAGG AAGTAAACGA CAGGCTGGGG CATCTTGCCG GTGACGAAGT ACTGGCATCC
ATGGCCCGCG TCATACGCGG CAGGCTGCGC CCCACCGATC TTCTGGCCCG CTGGGGCGGA
GACGAATTCA TCATCCTGCT GGACGGAAAT GAAGAAAGCG CCCGGGCGCT GGCACGGCGC
ATATCCGCCG CAGTATGCGC CGCTCCCGAC ATTCCTGTGG GGTTCAGTTC CGGTGTGGCG
GCCTACCGCG ACAGCGACGA CCTGACCTCC CTGACCCGAA GGGCCGACAA CGCCATGTAT
CAGGCAAAAG CACGGGGCGG CGACTGCGTC ATGGCAGCGG AAGATTTGTA A
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| Protein sequence | MQLKTRLISA LAAILITVFL ATSIINYVVT RNAVRDDLLR SALPLTGKNI YSEIHSALMR
PLLVSSAMAN DTFLRDWVTG GEQNEDAVRR YLSRIKKEYG FLSTFFVSAV TDRYYTPDGI
LKKIGPRDPH DVWFYAFTRY KEPYDLDIDV NQAAGNTMTV FVNFRLEDDR GRLLGVTGAG
IALDKALELL DEAQRTYLRQ AFLIDQDGLI QIHPDTSLVE KAYITEMDGL RDIAPDILAG
QGDAVSLQYD AGGRHYLLTS RYIPEFKWHL LVVQDEMTAL RTARGNFMRT LAMGFVSTLV
ILALCVLAVN KYQARIEHLA RTDPLTGAAN RRELEERFDL AAYRASRDGI PFSILIIDLD
GFKEVNDRLG HLAGDEVLAS MARVIRGRLR PTDLLARWGG DEFIILLDGN EESARALARR
ISAAVCAAPD IPVGFSSGVA AYRDSDDLTS LTRRADNAMY QAKARGGDCV MAAEDL
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