Gene Dde_3224 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_3224 
Symbol 
ID3758199 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand- 
Start bp3214173 
End bp3214604 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content58% 
IMG OID637784135 
Productphage shock protein C, PspC 
Protein accessionYP_389713 
Protein GI78358264 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG1983] Putative stress-responsive transcriptional regulator 
TIGRFAM ID[TIGR02978] phage shock protein C 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAAGAT TTGGTCCTGC AGGCTGCCGC GGCGGCCGCA ATCACAATAC CTGTCCGCCG 
CCGGAAGGCA GAACGCTGTA CCGCGCGCGT GACGGAAAGA TAATGGGTGT GTGCAAGGGG 
CTGGCCGAAT ATTTTGAAGT CGAGCCGGTC TGGATACGCC TGTTTACCAT TCTCGGTGCG 
CTGGCGACAG GTATCTGGCC TGCGCTGGGA ATTTATATTC TGGCCGGGCT GCTGATGAAG 
CCTAAGCCCG TCATGCCGGT GCGCGATATC CACGAGGGAG AATTCTATTC TTCGTATGTA 
TCTTCGCGCA AGGCGGCACT GGCGCGGCTT AAGGAACAGT TTGCACGTCT TGACAGGCGT 
ATCCGCCGTA TGGAGGATGC CGTGACCAGC CGCGATTTTG ACTGGCAGCG GCGGTTTGAC 
GACAGACGCT GA
 
Protein sequence
MRRFGPAGCR GGRNHNTCPP PEGRTLYRAR DGKIMGVCKG LAEYFEVEPV WIRLFTILGA 
LATGIWPALG IYILAGLLMK PKPVMPVRDI HEGEFYSSYV SSRKAALARL KEQFARLDRR 
IRRMEDAVTS RDFDWQRRFD DRR