Gene Dde_3043 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_3043 
Symbol 
ID3758036 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand+ 
Start bp3034819 
End bp3035874 
Gene Length1056 bp 
Protein Length351 aa 
Translation table11 
GC content63% 
IMG OID637783952 
ProductD-alanine-D-alanine ligase and related ATP-grasp enzyme-like 
Protein accessionYP_389532 
Protein GI78358083 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1181] D-alanine-D-alanine ligase and related ATP-grasp enzymes 
TIGRFAM ID[TIGR01205] D-alanine--D-alanine ligase 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTGTAG CCGTTGTATA CAACGCTGTG CAGCCCGACG GCAGACCCGA TCAGGAAGAC 
ACCCTGCTTC AGGCGCGTGC GGTGCACGAC GCCCTGATAC GCCGCGGACA CGCGGCGGAA 
CTGCTCAGCA TGACACTGGA CCTGCATGCC GCCTCGCTGC GCATCGCGGC GCTGAATCCG 
GACGTGGTGT TCAATCTGGT GGAAGAACTT GACGGCGATA TCGCCATGGC GCCGCTTGCT 
CCGGCGCTTT TCGCCCATGC GGGCATACCT TTCACCGGCG CGGACGCTGC CTCCATGACG 
CTTTCGGGCA GTAAGCTGCT GTGCAAACAG ATACTGACCG GTGCGGACAT ATGCACACCG 
GCATGGGTGA CGGCCGACGG CGTCTGCGGA GGCATGGGTG ACCTGCCCCG CACTGCGGAC 
GCGTTCATAC CCGGCAGGTA CCTGTGCAAG TCGGTGCATG AACATGCTTC GCTGGGGCTG 
GACGACAGCT GCATCGTGGA CGCGGTGCAG ACCGGCGATG TCATGGCGGC GCTTATGCGC 
TGCCGGACAC GGCACGGCGG GACATGGTTT GCCGAACAAT ACGTCGAGGG CAGAGAATTC 
AACATCGCCG CCATTGCCGA CGGCAACGGC GGGGTGCATG TGCTGCCCTG CGCGGAAATC 
GAATTCCGCG GCTACGCGCC GGAACGTCCC CGCATAGTGG GGTACGCCGC CAAATGGCAT 
CAGGATTCGT TTGAATGCAG CAACACGGTC AGGCGGTTTG ACTTCTGCGC GGAAGACTCG 
GCCCTGCTTG AGCTGCTGCG CACAGTCACT GTCCGGTGCT GGCGTGCATT CGGCCTTGCC 
GGATACGCGC GCATCGACTT CCGCGTCAAA GGAGACGGTT CCCCACAGGC GCCCTACATT 
CCCTGTGTCA TTGATGTGAA CTCCAACCCC TGCATTGCCC CCGATGCCGG TCTGGCTGCC 
GCCGCAGAAA AAGGCGGCAT GGACTATGCC GGACTGGTGG AAGGCATTGT ACAGGCAGCC 
GTGAAGGAGG ACCACCCCCC ATGCCGCAGA CCCTAA
 
Protein sequence
MRVAVVYNAV QPDGRPDQED TLLQARAVHD ALIRRGHAAE LLSMTLDLHA ASLRIAALNP 
DVVFNLVEEL DGDIAMAPLA PALFAHAGIP FTGADAASMT LSGSKLLCKQ ILTGADICTP 
AWVTADGVCG GMGDLPRTAD AFIPGRYLCK SVHEHASLGL DDSCIVDAVQ TGDVMAALMR 
CRTRHGGTWF AEQYVEGREF NIAAIADGNG GVHVLPCAEI EFRGYAPERP RIVGYAAKWH 
QDSFECSNTV RRFDFCAEDS ALLELLRTVT VRCWRAFGLA GYARIDFRVK GDGSPQAPYI 
PCVIDVNSNP CIAPDAGLAA AAEKGGMDYA GLVEGIVQAA VKEDHPPCRR P