Gene Dde_2974 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_2974 
Symbol 
ID3757979 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand- 
Start bp2957082 
End bp2957708 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content60% 
IMG OID637783875 
ProductSOS mutagenesis protein UmuD 
Protein accessionYP_389463 
Protein GI78358014 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG1974] SOS-response transcriptional repressors (RecA-mediated autopeptidases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.979623 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGTTGT GCCGAAGCAC GCAAATACCG GAGGATGACA TGTCGTACCA CAGCGGACTG 
CCCCAACAGC CTTACGGGGT CAAGCTTTTT GCGGAAAAGA TACCGGCGGC GCATGCATTG 
CGGCCTTCCC GCACCCGTGA CGCCGTTCCG GCACATGCGC ACACCGGCGG TGCTGACGGT 
CTGCATATGC TGGCGGGTGC GGTACCGCAG CATGAGGGGG CGGAGAAAAT CCGTCATGCC 
GCAGCGGACA GACCGCTTAT GCTGTCCTGC GTGGCGGCCG GTTTTCCTTC ACCGGCAGAC 
GATTACATAG ACAGGCGGCT GGACCTGAAC GAATATCTGG TGCGTAACCC CGAATCGACA 
TTTTATGTGC GCGTCCACGG TGAATCCATG CGCGATGCCG GTATCTGGGC CGGAGATATT 
CTGGTGGTGG ACCGTGCCGT GCAGCCTGCC ACCGGCCGGG TGGTGATAGC CGTGCTGGAC 
GGGGAACTGA CCGTAAAGCG GCTTAAAAAA GAAGGAGACC GTCTGCTGCT GGTTCCGGAA 
AATCCGGATT ACAGTCCCGT TGATGTCAGC GGGCGCGAAG ATTTTTCCGT CTGGGGGGTG 
GTAACCTGTG TGTTGCACAG GGTGTGA
 
Protein sequence
MLLCRSTQIP EDDMSYHSGL PQQPYGVKLF AEKIPAAHAL RPSRTRDAVP AHAHTGGADG 
LHMLAGAVPQ HEGAEKIRHA AADRPLMLSC VAAGFPSPAD DYIDRRLDLN EYLVRNPEST 
FYVRVHGESM RDAGIWAGDI LVVDRAVQPA TGRVVIAVLD GELTVKRLKK EGDRLLLVPE 
NPDYSPVDVS GREDFSVWGV VTCVLHRV