Gene Dde_2887 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_2887 
Symbol 
ID3757891 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand
Start bp2874678 
End bp2875862 
Gene Length1185 bp 
Protein Length394 aa 
Translation table11 
GC content44% 
IMG OID637783788 
Productputative glycosyl transferase 
Protein accessionYP_389377 
Protein GI78357928 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTTCAAA AAGGAGTGCA TGCTTTGATT AGAGTTGCTT GGCCTGTCGC TAATGACCCC 
TCCTGGGTCG CGGGCTTAAA CTATTTTCGC AACCTATTGC TTGCGCTATT GGACAATCCC
TTAAATACGA TAGAGCCCGT TATTTTAGGG GATAAGCAAT CGTTGCCTGC TGCCTTTCAA
AATCAACCAA GTATCCCTTA TTTCCCCGCC CTTACAGGTT CGAAGCTTTC CCCCATAAGA
GTTTGGGATA AATTGTTGCG CACTGCAGGT ACCCGTGGAG GACTTTTGAG CCGCCACTTA
GAACAGCATG ATATACAAGC TCTTTTTCCG TTTGGGCCAT TAGGTAGACG TTCGCGTGTC
CCTGTGATCA GCTGGATTCC AGATTTCCAG CATCGTCACC TCCCTCATTT TTTTTCCTCG
AAGGAGTTGC GTGCCCGAAA TCGGCAGCAT AGTGCAATGG CTTCAGATTC CCAGCTTATA
GTCGTCAGCA GCCATGTTGC ACGTCAGGAT TTTTTAAAAT TCCATCCCGG TTATGAGCAT
AAAGTACGTG TTTTACAATT TGCCGCGTCA CTCCCTCCAG ATTTAGATCC CGCAACCTCT
GAGAGTGTTT TAAAAAAATA TGACATCCGC GAACCATATT TTCATGTTCC GAACCAGTTG
TGGGCGCACA AAAACCACTC AGTGATTGTT GAAGCGTTAG CCATTCTGAA ACAAAGGAAA
CAAGCCCCTC TGGTTGTCAG TACAGGTAGG ATTCAAGACG TGAGGAACTC TGATTATGCG
AGTTCTCTTA TTAAGAAAAC AAAAGAGCTG AGACTTGAGA GCCATTTTAG ATTCTTAGGG
TTAATCCCAT TTGACGATTT GTGTATCATT CAACGGAATG CTATTGCGCT TATCAATCCG
TCACTTTTTG AAGGGTGGAA TACTGCGGTT GAAGAAGCAA AGGCGATGGG AAAGCAAATT
ATACTTTCCA ACATCCCTGT TCACAAAGAG CAAGATCCAG CACGCGCTAC ATTCTTCTCT
CCTGATAATC CTGAGGAATT GGCAGAAGCT TTGTTGCGCT CGGCAGCATC ATTTAATCTT
CAAGAAGAAG AAAAAGCCAA GCTAGTTGCA AAAAAGGCTC ATAGGGTCAC TTTTAATTCA
TTTGCAACTA ACTATGAAAA TATAGTCAAG GACGCAATTA AATAG
 
Protein sequence
MVQKGVHALI RVAWPVANDP SWVAGLNYFR NLLLALLDNP LNTIEPVILG DKQSLPAAFQ 
NQPSIPYFPA LTGSKLSPIR VWDKLLRTAG TRGGLLSRHL EQHDIQALFP FGPLGRRSRV
PVISWIPDFQ HRHLPHFFSS KELRARNRQH SAMASDSQLI VVSSHVARQD FLKFHPGYEH
KVRVLQFAAS LPPDLDPATS ESVLKKYDIR EPYFHVPNQL WAHKNHSVIV EALAILKQRK
QAPLVVSTGR IQDVRNSDYA SSLIKKTKEL RLESHFRFLG LIPFDDLCII QRNAIALINP
SLFEGWNTAV EEAKAMGKQI ILSNIPVHKE QDPARATFFS PDNPEELAEA LLRSAASFNL
QEEEKAKLVA KKAHRVTFNS FATNYENIVK DAIK