Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dde_2729 |
Symbol | |
ID | 3757752 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
Kingdom | Bacteria |
Replicon accession | NC_007519 |
Strand | + |
Start bp | 2730997 |
End bp | 2732406 |
Gene Length | 1410 bp |
Protein Length | 469 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637783631 |
Product | drug resistance transporter, putative |
Protein accession | YP_389220 |
Protein GI | 78357771 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.781327 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAACAAT TTCTTTCCGG CCCCCGCGCG GGCATATCGT CAGGACTGCC GGTGCTGTAC ACCGTGGCCG CCACCCAGTT CATCATGCCG TTCATGTTTT CGGGCGTGGC CGTCACCCTG CCGGTCATGG GGCAGGAGTT CGGGGCGGGC GGCACGGCGC TGGGGCTTGT GGAATCCATA TATCTTGCCG CCACGGGCGC TCTGCTGCTG CCTTTGGGCA GGCTGGCCGA CATGGCGGGG CACGCCCCGC TTTTCCGCTC GGGCGTGCTG CTGTACGCCG TTTCCACACT GCTGCTCAGT TTTACGCAGG ACATGACAAC CTTCATTCTG CTGCGTCTTG TGCAGGGCAC CGGCGCTGCC ATGACCATGG CGTCCAACAT GGCCCTGCTG ACCAAAGCCA TTCCGCGCAG CGAACGCGGC AGGGCCATGG GCATAGCGGT GGCCAGCGTG TATCTGGGGC TTTCTGCAGG GCCGTTTCTG GGAGGCGCCA TCGCCACGCA TCTGGGCTGG CGCTGGCTGT ACATACTGGG AACACCGCCG CTGGCGCTGG CCTATCTGCT GGCACGCCGC AACCTTAAAG AACGCTGGCA GCCCGTAACG GAACCATTTG ACTGGGCCGG GGCCGCGCTT TCGGTCTGCG CCGTGGGTCT GGCTGTTTTC GGCGGGCCCA GACTGGCGGC CGGCCCCGGC GGCATACTGG CACTGGCCGG CAGCATGGTC TGCGGCGCAC TTTTTCTGGT GGTAGAATCA CGCACAGCCA ATCCGCTGCT CGACCTTGCC CTGCTGCGGC GCAACAAAAC GTTCAGCTTT GCCACGGCTG CCCAGTTCAT CAATTATGCC GCAACATTCG GCATCACATT TCTGTTCAGT CTGTATCTGC AGAACGCCCG CGGCATGACT GCGCAGGAGA CCGGCACCGT ATTGCTGGTA CAGCCTCTGG TGCAGACGCT GCTTTCGCCG TTGTGCGGAC GGCTGGCAGA CAGCATGCCC GCGCACCGCA TAGCCACGGC GGGCATGGCA TGCTGCACCG CGGGCACCCT GATGGCGGCC ATGACCGGCG CAGACACGTC CATGGCTTTC ATGCTGACCA TGTTTGTGGT GCTGGGGGTG GGTTTTGCCC TGTTTGCATC GCCCAACATG AGCATCATCA TGGGCAGCGT GCAGACCGGC CGCTACGGCA TAGCCTCGGC CATGGCGGCC AGCATGCGCA CGCTGGGCAT GGTACTCAGC ATGGTTCTGG TAACCGCCGC CATGTCGCTG CATACGGGCG ATGCCGTGGT GACCGCAGAA AACGCCGACG CCTTTATTTC GGCCATGCGC TGGTCGTTTG CCGTTTTTTC GGCACTGGGA GGCTTCGGAG TGGCACTTTC TCTTTTCGCC TCGCTTTCGC CGGATGCCCC CCGCGAATAA
|
Protein sequence | MKQFLSGPRA GISSGLPVLY TVAATQFIMP FMFSGVAVTL PVMGQEFGAG GTALGLVESI YLAATGALLL PLGRLADMAG HAPLFRSGVL LYAVSTLLLS FTQDMTTFIL LRLVQGTGAA MTMASNMALL TKAIPRSERG RAMGIAVASV YLGLSAGPFL GGAIATHLGW RWLYILGTPP LALAYLLARR NLKERWQPVT EPFDWAGAAL SVCAVGLAVF GGPRLAAGPG GILALAGSMV CGALFLVVES RTANPLLDLA LLRRNKTFSF ATAAQFINYA ATFGITFLFS LYLQNARGMT AQETGTVLLV QPLVQTLLSP LCGRLADSMP AHRIATAGMA CCTAGTLMAA MTGADTSMAF MLTMFVVLGV GFALFASPNM SIIMGSVQTG RYGIASAMAA SMRTLGMVLS MVLVTAAMSL HTGDAVVTAE NADAFISAMR WSFAVFSALG GFGVALSLFA SLSPDAPRE
|
| |