Gene Dde_2713 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_2713 
Symbol 
ID3757736 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand+ 
Start bp2715204 
End bp2715860 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content61% 
IMG OID637783615 
Productlipoate-protein ligase B 
Protein accessionYP_389204 
Protein GI78357755 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0321] Lipoate-protein ligase B 
TIGRFAM ID[TIGR00214] lipoate-protein ligase B 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.298304 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGATTA TCGATCTGGG GTGCATACCC TACGCCGAAG CCGTGGAAAT ACAGACCGGA 
CGGGTGCAGG AGGTTGCCGC AGGAGCGGAA AACACCCTGT ACCTGCTGGA ACACCCGAAG 
GTCATAACCT TCGGGCGCAA CGGCGGCCGC GAAAACCTGC ACGTGGACGA CAGCACTCTG 
GCTTCCATGG GTATAGAGGT GGCGCAGACC ACCCGCGGCG GCAACATAAC CTGCCATTTT 
CCCGGCCAGC TTGTCGCCTA CCCCGTCTTC CGCATTGCGG GGCGCCCCGG TGGCATGCGG 
GCCCTGTTTT ACAGTCTTGA GGAAGTGGTC ATCAGGACGC TGGCCCGTTT CGGGCTGCAG 
GCCTTCCGCA GTGAAGGCCG CCCCGGTGTC TGGATAGAAA ACCGCAAAAT ATGCTCCATC 
GGCATTGCCA TGCGCCGGTG GACCTCGTAC CACGGGCTGG CACTCAACGT GTGCCGCGAT 
GTAAGCCTGT TTGACATGAT AACGCTGTGC GGCCTGACAG ATGCCCGCGC CACGTCACTG 
CAGGCCGAAT GTAACGATGA CAGCATCACC CTGCAGGAGG TGAAAGATGT CTGCGCAGGA 
GAATTCCGCG CCGTTTTTGC GCATCCCCCC GTGGCTGCGC ACCAGAATTC CGTGTAA
 
Protein sequence
MQIIDLGCIP YAEAVEIQTG RVQEVAAGAE NTLYLLEHPK VITFGRNGGR ENLHVDDSTL 
ASMGIEVAQT TRGGNITCHF PGQLVAYPVF RIAGRPGGMR ALFYSLEEVV IRTLARFGLQ 
AFRSEGRPGV WIENRKICSI GIAMRRWTSY HGLALNVCRD VSLFDMITLC GLTDARATSL 
QAECNDDSIT LQEVKDVCAG EFRAVFAHPP VAAHQNSV