Gene Dde_2600 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_2600 
Symbol 
ID3757622 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand- 
Start bp2619102 
End bp2620172 
Gene Length1071 bp 
Protein Length356 aa 
Translation table11 
GC content63% 
IMG OID637783501 
Productlipid-A-disaccharide synthase 
Protein accessionYP_389091 
Protein GI78357642 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1663] Tetraacyldisaccharide-1-P 4'-kinase 
TIGRFAM ID[TIGR00682] tetraacyldisaccharide 4'-kinase 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0347536 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTTCTC TGCCGTTGCA GAAATCTCTT TACCCCCTGC TGCGTCCGCT GGGCGCGGCA 
TATCGTGTAT TGATGCGGGC GCGCAGACGC CGGTACGAAA ACGGCGCCGC CTGCGGCACT 
GATGTTCCGT GTGTTTCCGT GGGCAACATC GGCTGGGGCG GCAGCGGCAA GACGCCGGTG 
GTGCAGTGGT TGCTGCAGTG GGCTGCCGTA CACGGCCTGC ACGCCGTGGT GCTGACGCGC 
GGTTACAAGG CTTCGCCGCC CGGACTGCCT TATGTGGTGA CGCCGCAAAG CTCTGCGGCA 
CATGCGGGGG ACGAACCGCT GATGCTGGCG CGCAGCTGTC CGCAGGCCAC TGTGGTAGTG 
GACCCTGTGC GCAGCCGGTC CGCCCGTTGG GCGCAGGAGC GGCTGGCTCC CGATTTTTTT 
GTGCTGGATG ACGGATTCCA GCATGTGCAG GTAGCCCGCG ATACTGATCT GGTTCTGCTG 
AAAAAAGATG ATCTGCACGC GGAATGGGGG CGTGTATTGC CTGCCGGTTC ATGGCGCGAA 
GGGCCGGAAG CCCTCTCACG CGCAGCGGCG TTCTGCATAA AGTGCGGCAG CGGTGAATTT 
TCCGGCCTTG TTCCGGATTT TGAGAACCGG CTGGGCAGCT TCGGAGTGCC GGTGTTCGGT 
TTTTCACTGC GGCCCGGCGC CCTGATACCT GTCTGCGGTG CGCATGAAGG TGCGCAGCTG 
CCTGCGGGGG CGCCGTATGT GCTTTTCAGC GGTGTGGGCG ACCCTGCTCA GGTTGCAGTT 
ACCGTCAGCA GTTTTTTAGG GTATGATCCC GTCAGGCATC ATGTGTTTGC CGACCATCAC 
GGGTATACAC AGGCGGACAT GGACCGCATG GCCGGTTACG GGCTGCCGCT GGTGTGTACT 
CCCAAAGATG CGGTAAAACT GACGGCACCG TGCGGGGTTC CGGTGTGGAC CCTGTCGCTG 
GAGACAAATT TTCATTCCGT ATGGAACGCG CAACCTCCGG CAGGGCAGGC CGGTGAAGGT 
TTTGCGCAAT GGTGGCAGTG CCGCTGGCAA CGGCTGGCAG GCCTGCGCTG A
 
Protein sequence
MSSLPLQKSL YPLLRPLGAA YRVLMRARRR RYENGAACGT DVPCVSVGNI GWGGSGKTPV 
VQWLLQWAAV HGLHAVVLTR GYKASPPGLP YVVTPQSSAA HAGDEPLMLA RSCPQATVVV 
DPVRSRSARW AQERLAPDFF VLDDGFQHVQ VARDTDLVLL KKDDLHAEWG RVLPAGSWRE 
GPEALSRAAA FCIKCGSGEF SGLVPDFENR LGSFGVPVFG FSLRPGALIP VCGAHEGAQL 
PAGAPYVLFS GVGDPAQVAV TVSSFLGYDP VRHHVFADHH GYTQADMDRM AGYGLPLVCT 
PKDAVKLTAP CGVPVWTLSL ETNFHSVWNA QPPAGQAGEG FAQWWQCRWQ RLAGLR