| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_2552 |
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| Symbol | |
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| ID | 3757569 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007519 |
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| Strand | + |
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| Start bp | 2568890 |
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| End bp | 2570443 |
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| Gene Length | 1554 bp |
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| Protein Length | 517 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637783448 |
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| Product | transglycosylase SLT domain/extracellular solute-binding domain-containing protein |
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| Protein accession | YP_389043 |
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| Protein GI | 78357594 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4623] Predicted soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGCGCA AACACGGGAG CCGTACTCTG AAAACCCGCG CGCTGTACGC CATTACCGGC
ATCACCGTTT GCGTCCTGCT GGCCGCTCTG GTCTTTTTTG CAGTACGCCA TCTGCCGGAA
CCTGCCGCCC CGCTGCCCGG ACAACAGACG GAAAACGGCC GCCAGTTACG GCGCCGCCTG
CTTGAGCAGG GTATTTTCAA ACCGTTCACC GGCGATATCG ACGCCATCAG ACGACGCAAA
GTGCTGCGCA TGCTGGTGCC GTACAACCGC ACAGACTATT TTCTGGACGG CGCCGCCCAG
CGCGGCCTTG CCTACGACAC CGGCACCGCT TTCGCCGGCT GGCTAAACAA ACGGCTGGGA
CTTACCGGCA CACGCCGCAT CTCGCTGCTG TTTATTCCGG CAGCCCCCGA CGATATGCTG
CGCATGCTGC GCGAAGGACA GGGGGATATG ATCGGCTACG AATGCCTTGT GCCCGGAACA
CTGCCCGACG ACGTGACCGC AGCCGGACCG TGGTCGCGCA CCGCACAGGT TGTGGTGGTC
TCGCGGCAGT CCGTGCCCCC CCTGCAATCC CTTGCGGAGC TCTCCGGAAA AACTGTGTAT
GTGCTGAAAA ACAGTGCTGT CGCACAAATT CTGGACGCCA CAGCGCGCAC TATGACAACC
ACGGGGATTC CTGTGCGCGG CATGGCGGTG GAAGGCGGAC TGACGCAGGA AGACCTGCTG
GACATGGTGA GCGGCGGCAG CATAGCCTTT GCCGCGGCAG AAGCGGATAA AGCAGCGCTG
TGGGCGCGCG TGCTGCCCGA CCTGCAGGTA CACGCCAACG CCCCCCTGAC AACGAACGCC
ACCCGCGCAT GGCTGCTGCG CAGTGACACG CCGCAGCTGA ACACCCTGTG CAACGAATTC
ATACGGCAGT ACAGACGCAC CACCGACTAT GCATGGCTGC GGCAGAAATA TTTCAGCCGC
ACCACATATG TGGCGGATGG CGGCCGTTCG CAGGAACTTG CCAGACTGGA GGCCACGCTG
CCGCTGTTCA TAAAGTACGG CGAGCAGTAC GATTTTGCCC CGCTGCTGCT GGCGGCGCAG
GGGTATCAGG AATCGCGCCT GAACCAGCAG GCACGCAGCC ACAAGGGGGC TGTGGGCATC
ATGCAGCTGC TGCCGGCTAC GGCTGCCGCC AGCCCTGTGG GCATCACCGA TATTTCAACA
CCGGAAAACA ACATCCATGC CGGAGTGAAG TACCTCGCCC ATCTGCGCGA CACCTATTTC
GATTCCGAAG GCATAAACTA TCTGGACCGG ATGCTGCTTT CGTTCGCCGC ATACAACGCG
GGGCCCGGCA ATATCCGCAA GGCGCGGCGA GCCACAGCGC AGATGGAACT GAACCCCGAT
GTATGGCGCA ATAACGTGGA AAAAGGCGTC GCTGCCACCA TCGGACAGGA ACCTGTACGC
TATGTGCGCA ATATAATAAC TTATTATATT GTTTTTCAGT TGGTGCGCGA ACATCGCCAC
ATCCGCGATG CGGCTCTGCA GCAGCTGGAC ATCGCGCCGC ACTTCACCCG CTGA
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| Protein sequence | MPRKHGSRTL KTRALYAITG ITVCVLLAAL VFFAVRHLPE PAAPLPGQQT ENGRQLRRRL
LEQGIFKPFT GDIDAIRRRK VLRMLVPYNR TDYFLDGAAQ RGLAYDTGTA FAGWLNKRLG
LTGTRRISLL FIPAAPDDML RMLREGQGDM IGYECLVPGT LPDDVTAAGP WSRTAQVVVV
SRQSVPPLQS LAELSGKTVY VLKNSAVAQI LDATARTMTT TGIPVRGMAV EGGLTQEDLL
DMVSGGSIAF AAAEADKAAL WARVLPDLQV HANAPLTTNA TRAWLLRSDT PQLNTLCNEF
IRQYRRTTDY AWLRQKYFSR TTYVADGGRS QELARLEATL PLFIKYGEQY DFAPLLLAAQ
GYQESRLNQQ ARSHKGAVGI MQLLPATAAA SPVGITDIST PENNIHAGVK YLAHLRDTYF
DSEGINYLDR MLLSFAAYNA GPGNIRKARR ATAQMELNPD VWRNNVEKGV AATIGQEPVR
YVRNIITYYI VFQLVREHRH IRDAALQQLD IAPHFTR
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