Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dde_2490 |
Symbol | |
ID | 3757507 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
Kingdom | Bacteria |
Replicon accession | NC_007519 |
Strand | - |
Start bp | 2509640 |
End bp | 2510533 |
Gene Length | 894 bp |
Protein Length | 297 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637783387 |
Product | LysR family transcriptional regulator |
Protein accession | YP_388982 |
Protein GI | 78357533 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0105522 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGGGCATAA TGGTGCAGGA CTTTTTGAAC GACGTGCCGT TGCTGGTGGA AGTGGCCCGG CAGAAAAGTT TTTCCAAGGC AGCTGAGGCG CTGGGCATAG GTGTTTCCAC GCTTTCAAGG CGTATCAAAT TGCTGGAAAA GCGTATGGGG GTTCTGCTTT TTTACCGCGA TACGCGTAAT GTCGAATTGA CGGACAACGG TGCGTACCTG CTGGACCGCT GCGGTTTTGT GCTGGAAGAA GTGCAGAAGG CGTATGATTC TGTGGTGCTG AATATGCAAA AGCCTTCCGG ACTGGTGCGG GTATGCATGT TTCTTGATCT TTACGACGGA CTGCTTAAAA AAGTGCTTCT TGATTTTGCA GCCAGATGGC CGGACATCAG TCTTGAGCTG ACGTTTCAGG ACCATCCCGT GGATATGCGC ACCGCCCCCT TTGATGTGGC TTTTGTTACC GGAAACGCCA TTGCGCCTGC TCTGGTCACA CGCAAGCTGC TGACCATAGA ACCTTTTCTG TATGCCTCGC CTTTATTGCT TGAACGCTAT CCGATGCCCC GCGAACCCGA CGACCTGCAT CGCATGCCCT GCATTGTGCT GCAGCGTTTC GGCGGGCGGT GGCCCATGCA CAATGGCAGC CGGCAGGTGA CTGTGGATGT TGTGCCCCGA TACAGTTTCA GCTCTGTAGA GATGTGCCGC GATTTTCTGC TGGCCGGTCA CGGAGTGGCC CTGCTGCGTA AAGAGCGCGC CCGGCCGGAT GAAAAGGCGG GGCGGCTTGT ACGCCTGCTT CCCGACTGGA GCGGCGGGTT TGTTCATGAT GTGAATCTGG TGATGGGATC AAGACAGCTC CCCATGCGGG TGCGCCTGTT TGTCGACCAC GTACTGGCGC AGTTTGCGCC ATAG
|
Protein sequence | MGIMVQDFLN DVPLLVEVAR QKSFSKAAEA LGIGVSTLSR RIKLLEKRMG VLLFYRDTRN VELTDNGAYL LDRCGFVLEE VQKAYDSVVL NMQKPSGLVR VCMFLDLYDG LLKKVLLDFA ARWPDISLEL TFQDHPVDMR TAPFDVAFVT GNAIAPALVT RKLLTIEPFL YASPLLLERY PMPREPDDLH RMPCIVLQRF GGRWPMHNGS RQVTVDVVPR YSFSSVEMCR DFLLAGHGVA LLRKERARPD EKAGRLVRLL PDWSGGFVHD VNLVMGSRQL PMRVRLFVDH VLAQFAP
|
| |