Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dde_2354 |
Symbol | |
ID | 3757370 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
Kingdom | Bacteria |
Replicon accession | NC_007519 |
Strand | + |
Start bp | 2377114 |
End bp | 2377608 |
Gene Length | 495 bp |
Protein Length | 164 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637783250 |
Product | nuclease (SNase-like) |
Protein accession | YP_388846 |
Protein GI | 78357397 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1525] Micrococcal nuclease (thermonuclease) homologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.527166 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTATTT CTATGCGCGT TCTGCATATT GCCGCACAGC TATGCCTGTG GTGTCTTGCC GCTGCGGCAC ATGCCGGCCC CCTGCAATCT CCCGCGGCGG CTGTAATGCC CTACGCGCCG GCTGCGGCAC GGGTCGTCCG CGTGGTGGAC GGCGATACTC TGATAGTAGA CATAGACACC TATCCTCCGG TTTTCGGGCA GGCCATTCCC GTGCGGCTGG CGGGATGCGA CACGCCGGAA CTCAACGACC CGGACCCGCG TCTGCGGGCT CTTGCAGTGG CTGCCCGGGA ATTTGTCCGG CAGGTGCTGA GCGATGCTCC AGTGGAACTG CACGACATCG GTCGGGGGAA GTATTTCCGC ATCATCGCCC GTGTGCGGGT GGCAGGGCAG GACCTGAGCA CGCTCCTGCT GCAGGCCGGT CTTGCCGTAC CCTATGCGGG CGGCAAACGT CCGGACCACA GCGTGCTGCT TACTGCCGCA ACGGCCGCCC CCTAA
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Protein sequence | MSISMRVLHI AAQLCLWCLA AAAHAGPLQS PAAAVMPYAP AAARVVRVVD GDTLIVDIDT YPPVFGQAIP VRLAGCDTPE LNDPDPRLRA LAVAAREFVR QVLSDAPVEL HDIGRGKYFR IIARVRVAGQ DLSTLLLQAG LAVPYAGGKR PDHSVLLTAA TAAP
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