Gene Dde_2354 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_2354 
Symbol 
ID3757370 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand
Start bp2377114 
End bp2377608 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content65% 
IMG OID637783250 
Productnuclease (SNase-like) 
Protein accessionYP_388846 
Protein GI78357397 
COG category[L] Replication, recombination and repair 
COG ID[COG1525] Micrococcal nuclease (thermonuclease) homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.527166 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTATTT CTATGCGCGT TCTGCATATT GCCGCACAGC TATGCCTGTG GTGTCTTGCC 
GCTGCGGCAC ATGCCGGCCC CCTGCAATCT CCCGCGGCGG CTGTAATGCC CTACGCGCCG
GCTGCGGCAC GGGTCGTCCG CGTGGTGGAC GGCGATACTC TGATAGTAGA CATAGACACC
TATCCTCCGG TTTTCGGGCA GGCCATTCCC GTGCGGCTGG CGGGATGCGA CACGCCGGAA
CTCAACGACC CGGACCCGCG TCTGCGGGCT CTTGCAGTGG CTGCCCGGGA ATTTGTCCGG
CAGGTGCTGA GCGATGCTCC AGTGGAACTG CACGACATCG GTCGGGGGAA GTATTTCCGC
ATCATCGCCC GTGTGCGGGT GGCAGGGCAG GACCTGAGCA CGCTCCTGCT GCAGGCCGGT
CTTGCCGTAC CCTATGCGGG CGGCAAACGT CCGGACCACA GCGTGCTGCT TACTGCCGCA
ACGGCCGCCC CCTAA
 
Protein sequence
MSISMRVLHI AAQLCLWCLA AAAHAGPLQS PAAAVMPYAP AAARVVRVVD GDTLIVDIDT 
YPPVFGQAIP VRLAGCDTPE LNDPDPRLRA LAVAAREFVR QVLSDAPVEL HDIGRGKYFR
IIARVRVAGQ DLSTLLLQAG LAVPYAGGKR PDHSVLLTAA TAAP