| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_2162 |
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| Symbol | |
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| ID | 3757172 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007519 |
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| Strand | + |
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| Start bp | 2206737 |
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| End bp | 2208098 |
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| Gene Length | 1362 bp |
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| Protein Length | 453 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637783052 |
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| Product | MATE efflux family protein |
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| Protein accession | YP_388654 |
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| Protein GI | 78357205 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCCAGA CCCGATCCAC CGCAACACAG CAACACCCGT TCAGAACAAA ACCAGCCAGA
ACATTTCTGT CACTGGCTGT GCCGGTGCTG TTCTCGCTGG TGGCAGAACC GCTGACAGGT
CTTGCAGACA CGGCCTTTGT AGCCAGACTG GGCGAAGCGC CGCTGGCAGC ACTGGGCGTG
GGCACCATGA CCCTCTCGGC CATTTTCTGG GCATTCAATT TTCTGAGCAT AGGAACACAG
ACAGAAGTGG CACAGGCTCT TGGCGGCGGT AACAGAGAAA AAGCGGCAGA CACATGCGGA
GCCGCCCTGC TCCTTTCATG CTCACTCGGC GTGGTCACGG CTCTGGCGGC GCTCCCTTTT
CTGCATCCGA TCGTAACTTT CATGGGGGCC GACGAAACCA TGGCTCCGCT GGCAGCAGAA
TACATCCGCC TGCGCCTTGT GGGGGCTCCC GCCCTGCTTG TGACTCTGGC CGGCATCGGA
GCGCTGCGGG GGCTGCAGGA CATGCGCACA CCGTTCTGGG TAGCCTGCAT TGTCAATATA
ATGAACATTC TGCTGGACTG GCTGCTTATA TTCGGTATCG GGCCTTTTCT CGCGCTGGGC
GTTTCCGGTG CGGCACTGGC CACATCGTGC AGCCAGTGGG CCGGCGCGGC ATGGACGCTG
GCCGTGGTGT GGAAAAGGCT GCGTCCTTCA TGGCACATCC AGCTGCACGA CATAAAAAAG
CTGTTCACCA TCGGCGGCGA TCTTTTTGTA CGCTCAGGAA TGGTCATTCT GTTTCTGCTG
CTGGGCACCA GAGCAGCCAC CGCGGCAGGT ACTGACGCCG GAGCGGCGCA TCAGGCCATA
AGACAGTTTT TCATCTTCAC GGCATTGTTT CTGGATACCT TTGCCATTAC CGGACAAAGC
CTCATCGGTC TTTTTTTCGG CCAGCGCGAT ATTGCCGCAT CGCGTCTGGT CGCCTCTTTT
GTCTGCCGCT GGAGCCTGTG GACAGGTTGT CTGCTTTCTG TAGTGATGCT TGCAGGACAA
AAAGGCATCG CATGGCTGCT GGTGCCCGCA TCTGTGCTGG ATACATTTAT TCCCGCATGG
GTGGTGGCGG CGCTTATCCA GCCGGTGAAC GCACTCTCTT TTGCCACCGA CGGCATCCAC
TGGGGCACAG GTGATTTCCG CTTCATCCGC AACGCCATGG TTGCGGCTTC CACCACGGCC
ATTGCCGCTC TTATCTGCAT CACCTACCTG CAACCTGCCG CCATGCTCAA CTGGGTATGG
GGCATTACCG GACTGTGGAC TACAGTCCGT GCCGGATTCG GCCTGTACCG CATCTGGCCC
GGATCCCCGT CAGCCCCGCT GGGGCGCAGC AGCCCGCTGT AG
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| Protein sequence | MSQTRSTATQ QHPFRTKPAR TFLSLAVPVL FSLVAEPLTG LADTAFVARL GEAPLAALGV
GTMTLSAIFW AFNFLSIGTQ TEVAQALGGG NREKAADTCG AALLLSCSLG VVTALAALPF
LHPIVTFMGA DETMAPLAAE YIRLRLVGAP ALLVTLAGIG ALRGLQDMRT PFWVACIVNI
MNILLDWLLI FGIGPFLALG VSGAALATSC SQWAGAAWTL AVVWKRLRPS WHIQLHDIKK
LFTIGGDLFV RSGMVILFLL LGTRAATAAG TDAGAAHQAI RQFFIFTALF LDTFAITGQS
LIGLFFGQRD IAASRLVASF VCRWSLWTGC LLSVVMLAGQ KGIAWLLVPA SVLDTFIPAW
VVAALIQPVN ALSFATDGIH WGTGDFRFIR NAMVAASTTA IAALICITYL QPAAMLNWVW
GITGLWTTVR AGFGLYRIWP GSPSAPLGRS SPL
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