Gene Dde_2086 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_2086 
Symbol 
ID3757094 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand- 
Start bp2133328 
End bp2134386 
Gene Length1059 bp 
Protein Length352 aa 
Translation table11 
GC content57% 
IMG OID637782974 
Productputative glutamate synthase subunit beta 
Protein accessionYP_388578 
Protein GI78357129 
COG category[E] Amino acid transport and metabolism
[R] General function prediction only 
COG ID[COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.282601 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCAATC CCATGAATTT TGCTTTTTTA AGAAAATCCC CGCTACCGCC CAACGGCCGC 
AAAGTGGGCA TTATAGGTGC AGGCCCCTCC GGACTTGCCG CCTGCGGATA TCTGGCCTGT 
CTGGGATACG AGGTTGTGGT GTACGACAAA CTGCCGCAAC CCGGAGGATT GATGGTGTTC 
GGCATTCCCA GAAAGCGTAT TCCGCCTGAA CGTATCCGGG CAGGTGTGCG GCGCATGGAA 
CGACAGTTCG GAGTTGTGTT CCGCACAAAG ACAAAAATAT GCTGCAGTGC TCCGTTGCAT 
GAAGAGGAAG GCGATCACTT TTCCTGTGAT ATCCGCGGCC TCGGCGAGCT TGTGGAAGAG 
CATGATGCGG TCATGATCTG TACCGGTTCA TGGAAGTCCC GAAAGCTTGG TATTCCCGGA 
GAAAATCTGG CGGGAGTGCA TTCCGGCCTT GAGTTTTTGT TTCCCATCAG GGCGGCAAAA 
TATGCCTCGC CCAATGTCAC CATGCCCGAT GTGCGCGGAA AGCGCGTGGC TGTGGTCGGC 
GCCGGTCATT CCGCCGTTGA CGTGGTGGAC AGTGCCCATG CGCTTGGTGC CGCCAAAATA 
TACATGATAT ACAGACGGAC AGCCCGCGAG GCCCCCTGCG GCAGTTTCGA GATTGACCGC 
ATCTGCGAGA TGGGCGCCGA ATGGCTTGAG CGGCGCACAC CGCTGCGGGT GGAAGGTGAA 
TGCGGCGTGC AGCGGCTGGA GCTTGCCAAC GGTATGACCG GCGAGGCGGA GCATCTGGAT 
GTGGACATGC TTATAACTGC CATCGGTGAA ATTCCCACTC CTCCCTTTCA GCAGGAACTG 
GGGCTAGAAA ACGTACGCAA AGGCGAAGTG CGCTGGCTTC ATATGACCAG TATAGAGAAC 
GTGTTTGTCG CCGGAGATGT GCTGACAGGT CCCAGCAAGA TAGGCAAGGC TGTCTACAGC 
GGTTTGCGGG CTTCGCGATC GCTGACCAAC TGGCTTGACC TGAAGGCGCA GAACCGCGAG 
GGCGAATACA GATACGACGA GGACAGAATT GTCCCCTAG
 
Protein sequence
MSNPMNFAFL RKSPLPPNGR KVGIIGAGPS GLAACGYLAC LGYEVVVYDK LPQPGGLMVF 
GIPRKRIPPE RIRAGVRRME RQFGVVFRTK TKICCSAPLH EEEGDHFSCD IRGLGELVEE 
HDAVMICTGS WKSRKLGIPG ENLAGVHSGL EFLFPIRAAK YASPNVTMPD VRGKRVAVVG 
AGHSAVDVVD SAHALGAAKI YMIYRRTARE APCGSFEIDR ICEMGAEWLE RRTPLRVEGE 
CGVQRLELAN GMTGEAEHLD VDMLITAIGE IPTPPFQQEL GLENVRKGEV RWLHMTSIEN 
VFVAGDVLTG PSKIGKAVYS GLRASRSLTN WLDLKAQNRE GEYRYDEDRI VP