| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_1997 |
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| Symbol | |
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| ID | 3757004 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007519 |
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| Strand | + |
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| Start bp | 2040355 |
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| End bp | 2041071 |
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| Gene Length | 717 bp |
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| Protein Length | 238 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 637782884 |
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| Product | 16S ribosomal RNA methyltransferase RsmE |
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| Protein accession | YP_388489 |
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| Protein GI | 78357040 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1385] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR00046] RNA methyltransferase, RsmE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.650979 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGAACGT TTTTTCTTTC ACCGGACGAA TGGGACAGAC AGTGCACTCT TAGAGGCTCC
GAAGCACACC ATATGATAAA GGTGCTGCGG ATGCGTGCAG GAGACACCTG CCGGATTCTG
GACGGCAAAG GCCGTGAAGG CTTATTCATA ATACGCGGTA TGGATAAAAA CAGTGTGCAG
CTGGAGCTTG CAGAAACTGT CATGCACCCC GAACCGCATT CGCGCGCGTA TATTGCCCTG
GGCTGGGGCA AATCAGTAAG GCGCAGCTGG ATTTTTGAAA AGGCAGTGGA GCTGGAAGCT
GCGGGGATCT GGCTGTGGCA GGCGGCACGC AGCCAGTCAA AAATGCCTGA CATGACAAAA
GAAAGCTGGC ACAGCCAGCT TGTTGCAGGT GCAAAGCAAT GCGTCAACCC ATGGATTCCC
GAACTGAAAT CGGTGGCCGC TGGGGTGACC GGACTGGTCG AACTGGCTCA GGGCTTTGAC
CGTAAATTCA TTCTGTGGGA AGGAGAAGCC AGAGAAGCGT TGCTGTCTGG CGAAACCCTC
GGCACTTCAG GTGACACTCT GTTTGTAATA GGCCCCGAAG GCGGCTTCGC AGATGACGAG
GTCAGCCTGC TGAAAGAAAG CGGCTTTGCA GCCGCCAGTC TGGGCAACAG AATACTGCGC
TGGGAAACGG CGGCACTTCT TTGCCTTGGG CTGCACTTCT GGAGCAAACA ACGATAA
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| Protein sequence | MRTFFLSPDE WDRQCTLRGS EAHHMIKVLR MRAGDTCRIL DGKGREGLFI IRGMDKNSVQ
LELAETVMHP EPHSRAYIAL GWGKSVRRSW IFEKAVELEA AGIWLWQAAR SQSKMPDMTK
ESWHSQLVAG AKQCVNPWIP ELKSVAAGVT GLVELAQGFD RKFILWEGEA REALLSGETL
GTSGDTLFVI GPEGGFADDE VSLLKESGFA AASLGNRILR WETAALLCLG LHFWSKQR
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