Gene Dde_1961 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_1961 
Symbol 
ID3756967 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand
Start bp2009656 
End bp2010297 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content57% 
IMG OID637782847 
Producthypothetical protein 
Protein accessionYP_388453 
Protein GI78357004 
COG category[S] Function unknown 
COG ID[COG2121] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.232055 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATAA GTCCTTCTCT GGTCTGTCCG CCCTTGTACA CGCTATACAA GTTATGGTGT 
TCCACACTCC GGTATTCCGA AACCGGCCGG GAAGCAGTGG ACGCGCTGTG GAATCAGCGG
ACTCCCATGG TCTTTGCTCT GTGGCATGAC GAGCTGTTTC CGCTCATGCA CATCAAACGC
CAGCTGGACA TTGTAACGGT TGTCAGCCAG AGCAGAGACG GCGAGTATCT GGCCGGAGTA
CTGCGCAGAC TGGGGCTGCG CACCGCGCGG GGCTCAAGCT CGCGCGGAGG AGTTAAAGCT
CTGCTTCAGG CATCACGCAT GATGCGCAAT GAAGGCATCT GCGGCTGTGT GACTGTAGAC
GGCCCGCGCG GACCACGCCA TGTGGTGAAA GAAGGGGCGC TGTTTCTTGC GGCCAGAACG
CCCGCGCAGG TGGTTCCTGT GCGCATATTC ATGCAACGGC GCAAGGTATT TGAAAAAGCG
TGGGACCAGT TTCAGCTGCC TGTACCGTTC AGCAGCGTCC ATATTGTCTT TGGTGAGCCG
TATGCACCGC AGGCAACGGC TACAGACCAG AACATGCTGG CAAGTGCAGC GGCGCAACTG
CAGACAAAAC TCAACTCCCT GAAGAACCCG TACCATGTTT GA
 
Protein sequence
MKISPSLVCP PLYTLYKLWC STLRYSETGR EAVDALWNQR TPMVFALWHD ELFPLMHIKR 
QLDIVTVVSQ SRDGEYLAGV LRRLGLRTAR GSSSRGGVKA LLQASRMMRN EGICGCVTVD
GPRGPRHVVK EGALFLAART PAQVVPVRIF MQRRKVFEKA WDQFQLPVPF SSVHIVFGEP
YAPQATATDQ NMLASAAAQL QTKLNSLKNP YHV