| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_1958 |
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| Symbol | |
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| ID | 3756964 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007519 |
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| Strand | - |
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| Start bp | 2006150 |
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| End bp | 2007028 |
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| Gene Length | 879 bp |
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| Protein Length | 292 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 637782844 |
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| Product | pseudouridine synthase, Rsu |
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| Protein accession | YP_388450 |
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| Protein GI | 78357001 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.347299 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTAAAA AAAATGATCT CGTAAATAAA GCGCTGGCAC GACAAAAGCC TGCACGCAGC
GGCCTTTCCG CCCCGCGTAC GGCCCGTTCC GGTGCACTGG CACAATGCAA TGCTCCTGCC
GGACATGAGG CGGAACAGTC TGTGCGGATT AACAAGGCAC TGGCCGATGC CGGAGTCTGT
TCGCGTCGTG CAGCCGATGA ACTTGTGGCT CAGGGGGTTG TAACGGTTAA CGGGGTTGTG
GTGGATACCC CCGGCGTGAA AGTTGTTCCG GACAGGGATG AGCTCTGCGT TCGTGGTAAA
AAGATTTTCT TGAAGTCTTC TTCCTCCCGT AGCCATACCT ATTTGATGAT GCACAAGCCT
GTGGAAGTGG TCACTACCGT CAGTGATCCT GAAGGGCGCA GGACTGTCAT TGATATTCTG
CCCCCATTAC ATCGTAAAAA AAGACTTTTT CCTGTAGGAA GACTGGATTT TTTTTCAGAG
GGCCTGCTTT TGCTGACAGA TGACGGCGTG CTGACCCACA GACTTACTCA CCCTTCCTGG
CATCTGCCCA AGACATATCT GGTAAAGGTC AGAGGCGTGG TGCAGGACAA CGATCTGCAG
GCTATGCGAA AAGGGATGAC GCTTGCCGAG GGGGAAAAGC TTGCCCCCGT AGAGGTAGAG
GTGCTGAGCC GGCATCATGA CTGGCTGCTG TTGGAGATGA CTCTTTTTCA GGGTATCAAC
CGGCAGATTC GCAGGATGTG CAGGGATGCC GGTCTGACAG TGCTTTCTTT GCACAGAGTC
AGGCAGGGAC CGCTGTCGCT GGGAGAACTG CGTACGGGTG AAGTACGGGA ATTGACTGAC
AGTGAAATTG CGGCGCTGAA GGCTTCTGTG GATTTGTAA
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| Protein sequence | MTKKNDLVNK ALARQKPARS GLSAPRTARS GALAQCNAPA GHEAEQSVRI NKALADAGVC
SRRAADELVA QGVVTVNGVV VDTPGVKVVP DRDELCVRGK KIFLKSSSSR SHTYLMMHKP
VEVVTTVSDP EGRRTVIDIL PPLHRKKRLF PVGRLDFFSE GLLLLTDDGV LTHRLTHPSW
HLPKTYLVKV RGVVQDNDLQ AMRKGMTLAE GEKLAPVEVE VLSRHHDWLL LEMTLFQGIN
RQIRRMCRDA GLTVLSLHRV RQGPLSLGEL RTGEVRELTD SEIAALKASV DL
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