Gene Dde_1787 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_1787 
Symbol 
ID3756787 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand
Start bp1839396 
End bp1839908 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content50% 
IMG OID637782668 
Productputative lipoprotein 
Protein accessionYP_388279 
Protein GI78356830 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2825] Outer membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000149194 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAC GTGCTGTTTT ATTTTTGACG GTTATGAGCA TGCTGGTTCT GGCCGGCTGT 
AACCAGCCTG CTAAAAATAC CCCCGTTGTG GGTGTTGTGG ACATGACCCG TGTCTACGAA
GAATCCACAG CCGCAAAGGC CGGACAGGAA TATCTTGAAA ATCTGGCAGC CGACGCCAGA
AAAGAATTTG AAGGCATGCA GGCAGAAATG CAGAATGCTC AGGGAAATGA AGAAGCCACG
CAGAAAATGC ATGCCTCCAT CACCGACCTG CGCAACAGAA TCAATGCCGC CCAGCAGCGC
GTCATGGTTG CGCTGGATGA AAATCTTAAA AGCGTGATGC AGAAGTACAG AGCCGAAAAA
GGCTACGCCG TGCTCATGCA TAAGGAAGGA GTCATTTCCT ACGACGATAG CGTAGACGTG
ACTTCGGACA TCATCAGTGA AATGAATAAG CTCAGTGTCA CTTTTGAGGA AACCAACTCC
ACCGGCGACG CACCGGCACC GGATACCAAA TAA
 
Protein sequence
MKKRAVLFLT VMSMLVLAGC NQPAKNTPVV GVVDMTRVYE ESTAAKAGQE YLENLAADAR 
KEFEGMQAEM QNAQGNEEAT QKMHASITDL RNRINAAQQR VMVALDENLK SVMQKYRAEK
GYAVLMHKEG VISYDDSVDV TSDIISEMNK LSVTFEETNS TGDAPAPDTK