Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dde_1787 |
Symbol | |
ID | 3756787 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
Kingdom | Bacteria |
Replicon accession | NC_007519 |
Strand | + |
Start bp | 1839396 |
End bp | 1839908 |
Gene Length | 513 bp |
Protein Length | 170 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 637782668 |
Product | putative lipoprotein |
Protein accession | YP_388279 |
Protein GI | 78356830 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2825] Outer membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.000149194 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAAC GTGCTGTTTT ATTTTTGACG GTTATGAGCA TGCTGGTTCT GGCCGGCTGT AACCAGCCTG CTAAAAATAC CCCCGTTGTG GGTGTTGTGG ACATGACCCG TGTCTACGAA GAATCCACAG CCGCAAAGGC CGGACAGGAA TATCTTGAAA ATCTGGCAGC CGACGCCAGA AAAGAATTTG AAGGCATGCA GGCAGAAATG CAGAATGCTC AGGGAAATGA AGAAGCCACG CAGAAAATGC ATGCCTCCAT CACCGACCTG CGCAACAGAA TCAATGCCGC CCAGCAGCGC GTCATGGTTG CGCTGGATGA AAATCTTAAA AGCGTGATGC AGAAGTACAG AGCCGAAAAA GGCTACGCCG TGCTCATGCA TAAGGAAGGA GTCATTTCCT ACGACGATAG CGTAGACGTG ACTTCGGACA TCATCAGTGA AATGAATAAG CTCAGTGTCA CTTTTGAGGA AACCAACTCC ACCGGCGACG CACCGGCACC GGATACCAAA TAA
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Protein sequence | MKKRAVLFLT VMSMLVLAGC NQPAKNTPVV GVVDMTRVYE ESTAAKAGQE YLENLAADAR KEFEGMQAEM QNAQGNEEAT QKMHASITDL RNRINAAQQR VMVALDENLK SVMQKYRAEK GYAVLMHKEG VISYDDSVDV TSDIISEMNK LSVTFEETNS TGDAPAPDTK
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