| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_1742 |
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| Symbol | |
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| ID | 3756742 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007519 |
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| Strand | - |
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| Start bp | 1797091 |
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| End bp | 1800063 |
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| Gene Length | 2973 bp |
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| Protein Length | 990 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637782623 |
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| Product | type III restriction system endonuclease |
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| Protein accession | YP_388234 |
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| Protein GI | 78356785 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG3587] Restriction endonuclease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.109484 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACTTC ACTTCGAAGA TAACCTTGAC TATCAGCTTG ATGCTATACG TGCTGTTACT
GACATATTTA AAGGGCAGGA GCGCAACGCC TCTCTGTTCT CCGTTTCCAA GACGTATGCC
AAGGGCATGA TTGAATCTGA CAAGGGTATT GGTAACAGGC TCGAACTTCT CGACGACGAG
CTTCAGGAGA ACCTCAACGC TATTCAGCTG AGGAACGGTC TACGCCCAAC GCATTCTCTG
ACCAGCGGCG ACTTCACTGT CGAAATGGAG ACCGGAACAG GCAAGACCTA CGTCTATCTC
CGCACGATTT TCGAGCTGAA TAAGCGCTAC GGATTCACAA AATTCGTCAT TGTTGTGCCT
TCAGTGGCCA TCAAGGAAGG CGTCTACAAA ACGCTTCAGA TTACGAGAGA TCACTTCGAG
AACCTCTATC CCGAATCGAA GGGATATGAC TATTTTTCTT ATGATTCATC GAAGATGGGA
CAAGTTCGCA ACTTTGCGAC AAGTCCAAAC GTTCAGATCA TGGTTGTGAC TGTCGGTGCC
ATCCATAAAA AGGACGTCAA CAATCTTTAC AAGGAAAGCG AGAAGACAGG CGGAGATAAG
CCCATCGACC TTGTGAAGGC GACACACCCT GTCATCATCG TTGATGAACC GCAAAGCGTT
GATGGTGGCT TGAAGGGCCA AGGCAAGAAA GCCCTTGAAT CAATGAATCC GCTCTGCACG
TTGCGTTATT CTGCCACCCA CGTGGACAAA CATCACATGG TGTATCGTCT CGATGCTGTT
GATGCTTACG AAAAGCAGCT TGTTAAACAG ATTGAAGTCG CTTCGCTTGA AATTGATGGC
GGTTACAATA AGCCTTACGT CAAGCTTATT TCTACACAGA ACAAGCGCGG TGTCATATCC
GCAAAGATTG AAGTCCATAT CCAAAGTGGC AAATCTGTCC GTCCTCAGAT CATCACTGTT
CAGGACGGCG ACGACTTGGA GCAAGAAACC GGTCGCGCCA TTTATGAAAA CTTTCGTATC
GGCACGATCA ACTGCGGCAA GGGAAATCAG TCCATTGAGC TGAGCGTGCC TAACGGCGAA
TATGTCCTGT ATCCCGACGA TGAAATTGGT GGAGTCAATC AAGACGACAT CAAACGCCTC
ATGATCCGCC GCACAATTAA AGAGCACCTT GATAAGGAAC TTCGCTTTGC CGCGCTCGGT
CACAGAGTGA AAGTGCTCAG CCTGTTCTTC ATCGACAAGG TTGAATTTTA CCGCCAATAC
GATGAAGACG GGAACGAGAT TCAAGGCAAG TATGCCAAGA TATTTGAAGA AGAGTATCGC
AAGCTGGCAC ATAGCGACGA TTACCGCACG CTCTTTGAGG GGATCGATCT TGAATCCGAT
GCTTCGGAAG TCCACAACGG CTACTTTTCC ATCGACAAGA AAGGCAAGCT GACCGACACA
GCCGAAAACA ACCAGACCAA CCGCGACAAC GCAGAAAGGG CGTACAACCT GATCATGCGA
GACAAGGAAA AGCTTTTGAG TTTCACCTCA AAGCTCAAAT TCATTTTCTC GCACTCTGCG
CTCCGTGAAG GCTGGGATAA CCCCAACGTC TTTCAGATTT GTGTGTTGAG AGACATGGGA
ACTGAACTGG CAAGAAGGCA GTCCATTGGG CGAGGGCTTC GCCTTTGCGT CAATCAGGAC
GGCCAACGAC TTAGGGGCTT TGACGTAAAC ACGCTGACGG TCATTGCTAA CGAAAGCTAT
GAACAGTTTG CGGAAACGCT CCAAAAGGAA ATCGAAGAGG ACGCCGGAAT CCGCTTTGGT
GTTGTTGAAA AGCACCAGTT CGCAAACATT CCTGTTCAAG GAGCTGATGG CGAACTTCAT
CCCCTCGGTT TCAAGAAGTC GGAAGAGCTT TGGCGTATTC TCAAAGAGAG AGAGTTCATC
GATAAAAATG GCAAGGTGCA GGACACTCTT AGGACTGCCC TGAAAGAGAA GACGCTCGAA
CTTCCTGAAG AATTCAAGCC TGAACTTGAT GCTATATCTT CTGTTCTTCG AAAGCTGGCT
GGCAGGCTCG ATATTAAAAA CGCCGATGAA CGTATCACGG TAAAGCCAAA CAAAGAGCGG
CTGCTAAGTC CTGAGTTCCA AGAGCTTTGG GAGCGCATCA AGCACAAGAC GACCTATCGT
GTCGATTTCG ACAATGAGAA ACTGATTCAG GATTGTGCAA AATCCATCCT TGAAGGACCG
CCCATAACCA AGACAAGAGC GCGGTTCAGA AATGCGAATC TGGCGATTGG TGAGGGCGGC
ATTGAGGCAG ATGAAAAAGC TGTTAGCCAG TACACGACGA TAAATGAGTC TGACATCGAA
TTGCCGGACA TCCTCACCGA TTTGCAGGAT AAGACGCAGT TGACGCGAAA AAGCATCGTC
CGCATTCTCA CGTCTTGCCG AAGACTGAAC GATTTCAAAC GTAACCCTCA AGAATTTATT
CAGCTGGCGG CAGAGGCTAT CAACCGGACA AAGCGTTTGG CTCTTGTGGA AGGCATCAAG
TACCGCAGAA TCGGCGACGA ATACTACTAC GCTCAGGAAC TCTTTGAGAA AGAAGAGCTG
ACCGGATACC TCAAGAATAC CGTTGAGGTC CAAAAATCCG TTTATGAACG CGTCGTGTAT
GATTCTGCCG GAGTTGAACA GCAATTTGCC CAAGCACTGG AAAAGAACGA ATCAGTCAAA
GTGTACGCCA AGCTCCCCGG CTGGTTCAAA GTTCCTACCC CGCTTGGCAC CTACAACCCG
GACTGGGCCG TCCTTGTCGA GGAAGACGGA CATGAGAAGC TCTATCTGGT CGTAGAAACA
AAGGGTAGCC TCTGGTGGGA CGATCTTCGT CATCACGAGG GGGCAAAGAT CAAGTGCGGC
AAAGAACATT TCGCCGTTCT CGCCGAACAC GCCGATAATC CCGCGCGGTT CATCAAAGCT
AAAACGGTAG AAGACATGCT GTCATACGAT TAG
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| Protein sequence | MKLHFEDNLD YQLDAIRAVT DIFKGQERNA SLFSVSKTYA KGMIESDKGI GNRLELLDDE
LQENLNAIQL RNGLRPTHSL TSGDFTVEME TGTGKTYVYL RTIFELNKRY GFTKFVIVVP
SVAIKEGVYK TLQITRDHFE NLYPESKGYD YFSYDSSKMG QVRNFATSPN VQIMVVTVGA
IHKKDVNNLY KESEKTGGDK PIDLVKATHP VIIVDEPQSV DGGLKGQGKK ALESMNPLCT
LRYSATHVDK HHMVYRLDAV DAYEKQLVKQ IEVASLEIDG GYNKPYVKLI STQNKRGVIS
AKIEVHIQSG KSVRPQIITV QDGDDLEQET GRAIYENFRI GTINCGKGNQ SIELSVPNGE
YVLYPDDEIG GVNQDDIKRL MIRRTIKEHL DKELRFAALG HRVKVLSLFF IDKVEFYRQY
DEDGNEIQGK YAKIFEEEYR KLAHSDDYRT LFEGIDLESD ASEVHNGYFS IDKKGKLTDT
AENNQTNRDN AERAYNLIMR DKEKLLSFTS KLKFIFSHSA LREGWDNPNV FQICVLRDMG
TELARRQSIG RGLRLCVNQD GQRLRGFDVN TLTVIANESY EQFAETLQKE IEEDAGIRFG
VVEKHQFANI PVQGADGELH PLGFKKSEEL WRILKEREFI DKNGKVQDTL RTALKEKTLE
LPEEFKPELD AISSVLRKLA GRLDIKNADE RITVKPNKER LLSPEFQELW ERIKHKTTYR
VDFDNEKLIQ DCAKSILEGP PITKTRARFR NANLAIGEGG IEADEKAVSQ YTTINESDIE
LPDILTDLQD KTQLTRKSIV RILTSCRRLN DFKRNPQEFI QLAAEAINRT KRLALVEGIK
YRRIGDEYYY AQELFEKEEL TGYLKNTVEV QKSVYERVVY DSAGVEQQFA QALEKNESVK
VYAKLPGWFK VPTPLGTYNP DWAVLVEEDG HEKLYLVVET KGSLWWDDLR HHEGAKIKCG
KEHFAVLAEH ADNPARFIKA KTVEDMLSYD
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